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LINC02584 long intergenic non-protein coding RNA 2584 [ Homo sapiens (human) ]

Gene ID: 100009613, updated on 17-Sep-2024

Summary

Official Symbol
LINC02584provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2584provided by HGNC
Primary source
HGNC:HGNC:33275
See related
AllianceGenome:HGNC:33275
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ANO1-AS2; C11orf78; NCRNA00224
Expression
Restricted expression toward testis (RPKM 2.2) See more
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Genomic context

See LINC02584 in Genome Data Viewer
Location:
11q13.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (70072434..70075348, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (70089461..70092375, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (69918540..69921454, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene anoctamin 1 Neighboring gene long intergenic non-protein coding RNA 2753 Neighboring gene uncharacterized LOC105369371 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:69918266-69918443 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:69918988-69919601 Neighboring gene RNA, U6 small nuclear 1175, pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr11:69935765-69935935 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:69938122-69938334 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:69939545-69940046 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:69940047-69940546 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:69945353-69946112 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:69962362-69962862 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:69962863-69963363 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:69969469-69970107 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:69974897-69975729 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:69980445-69981644 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:69986885-69987698 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:69987699-69988510 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:70001450-70001950 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:70001951-70002451 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:70008633-70008799 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:70016639-70017140 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:70017141-70017640 Neighboring gene uncharacterized LOC101928473 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:70020559-70021264

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • ANO1 antisense RNA 2 (head to head)
  • ANO1 antisense RNA 2 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103835.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP003555, AW592641

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    70072434..70075348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    70089461..70092375 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)