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ATP2B1 ATPase plasma membrane Ca2+ transporting 1 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100009543, updated on 8-Mar-2024

Summary

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Gene symbol
ATP2B1
Gene description
ATPase plasma membrane Ca2+ transporting 1
See related
Ensembl:ENSOCUG00000016507
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Also known as
PMCA1
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See ATP2B1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (76166639..76281534, complement)

Chromosome 4 - NC_067377.1Genomic Context describing neighboring genes Neighboring gene POC1 centriolar protein B Neighboring gene ATP-dependent RNA helicase DDX19B-like Neighboring gene carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2-like Neighboring gene serine/arginine-rich splicing factor 6-like Neighboring gene uncharacterized LOC103348343

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067377.1 Chromosome 4 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression of cyclic-nucleotide-sensitive and -insensitive isoforms of the plasma membrane Ca2+ pump in smooth muscle and other tissues. Khan I, et al. Biochem J, 1991 Jul 15. PMID 1830473, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type calcium transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables PDZ domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma membrane calcium-transporting ATPase 1
Names
ATPase, Ca++ transporting, plasma membrane 1
Ca2+/Mg2+ ATPase
plasma membrane calcium ATPase
plasma membrane calcium pump
NP_001095189.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101719.1 → NP_001095189.1  plasma membrane calcium-transporting ATPase 1

    See identical proteins and their annotated locations for NP_001095189.1

    Status: PROVISIONAL

    Source sequence(s)
    X59069
    UniProtKB/Swiss-Prot
    Q00804
    UniProtKB/TrEMBL
    G1TBS4
    Related
    ENSOCUP00000014188.3, ENSOCUT00000016507.3
    Conserved Domains (2) summary
    TIGR01517
    Location:15 → 1064
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1104 → 1149
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067377.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    76166639..76281534 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q00804.3 GenPept UniProtKB/Swiss-Prot:Q00804

Gene LinkOut

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