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gnrhr4 gonadotropin releasing hormone receptor 4 [ Danio rerio (zebrafish) ]

Gene ID: 100001586, updated on 2-Nov-2024

Summary

Official Symbol
gnrhr4provided by ZNC
Official Full Name
gonadotropin releasing hormone receptor 4provided by ZNC
Primary source
ZFIN:ZDB-GENE-050419-76
See related
Ensembl:ENSDARG00000038116 AllianceGenome:ZFIN:ZDB-GENE-050419-76
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkeyp-84g1.5
Summary
Enables gonadotropin-releasing hormone receptor activity. Acts upstream of or within G protein-coupled receptor signaling pathway and cellular response to gonadotropin-releasing hormone. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including female organism; gonad; gut; male organism; and nervous system. Orthologous to human GNRHR2 (gonadotropin releasing hormone receptor 2 (pseudogene)). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See gnrhr4 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (25390740..25402710, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (25404013..25416164, complement)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene si:dkeyp-59c12.1 Neighboring gene perilipin 1 Neighboring gene uncharacterized LOC100537040 Neighboring gene peroxisomal biogenesis factor 11 alpha

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
gonadotropin releasing hormone receptor 4
Names
GnRH-R4<sup>SHS</sup>
gnrhr
gonadotropin-releasing hormone receptor GnRH-R4SHS

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001098193.1NP_001091663.1  gonadotropin releasing hormone receptor 4

    See identical proteins and their annotated locations for NP_001091663.1

    Status: PROVISIONAL

    Source sequence(s)
    EF534376
    UniProtKB/TrEMBL
    A0A2R8Q2W4, A3QJZ0
    Related
    ENSDARP00000055566.4, ENSDART00000055567.5
    Conserved Domains (1) summary
    pfam00001
    Location:66330
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    25390740..25402710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005159164.5XP_005159221.1  gonadotropin releasing hormone receptor 4 isoform X1

    See identical proteins and their annotated locations for XP_005159221.1

    UniProtKB/TrEMBL
    A0A2R8Q2W4, A3QJZ0
    Related
    ENSDARP00000148297.1, ENSDART00000179852.1
    Conserved Domains (1) summary
    pfam00001
    Location:66330
    7tm_1; 7 transmembrane receptor (rhodopsin family)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395028.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    130124..139487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)