GEO DataSets

(Submitter supplied) We aimed to delineate mechanisms of T. vaginalis resistance using transcriptome profiling of metronidazole (MTZ)-resistant and sensitive T. vaginalis clinical isolates.

Organism:

Trichomonas vaginalis

Type:

Expression profiling by high throughput sequencing

Platform:

GPL33257

24 Samples

Download data: TXT

(Submitter supplied) In this study, we performed deep sequencing and bioinformatics analyses of short RNAs from three strains of Trichomonas vaginalisto identify and characterize novel type of small RNAs. We detected a new type of small RNA from tranfer RNA known as tRFs and tRNA-halves.

Organism:

Trichomonas vaginalis

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL22655

3 Samples

Download data: FA, TXT

(Submitter supplied) In this study, we investigated genome-wide transcriptional and epigenetic responses of T. vaginalis to histone deacetylase (HDAC) inhibitors.

Organism:

Trichomonas vaginalis

Type:

Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL22655

20 Samples

Download data: BIGWIG

(Submitter supplied) T. vaginalis array designed using the T. vaginalis overkill array data. Oligos expressed in different conditions and have intensity above the 95th percentile of the negative control arabidopsis oligos were chosen. For the annotated transcripts, all the oligos designed 1 oligo/transcript is included in this array.. Arrays of this design have barcodes that begin with 16029850 or 2529850.. Orientation:. more...

Organism:

Trichomonas vaginalis

Download data