txid257309[Organism:noexp] - GEO DataSets

Select item 2001314851.

Identification of zinc and Zur-regulated genes in Corynebacterium diphtheriae

(Submitter supplied) We assessed changes in gene expression in response to zinc availability for the human pathogen Corynebacterium diphtheriae. Expression profiles of wild-type C. diphtheriae strain 1737 grown in semi-defined metal-poor media (mPGT) without and with 5 µM zinc chloride supplementation were compared; the expression profile of wild-type C. diphtheriae strain 1737 in zinc-replete conditions was also compared against an isogenic Δzur mutant grown in zinc-replete conditions. more...

Organism:: Corynebacterium diphtheriae; Corynebacterium diphtheriae NCTC 13129

Type:: Expression profiling by array

Platform:: GPL25539
9 Samples

Download data: TXT, XLSX

Series

Accession:: GSE131485

ID:: 200131485

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2001196212.

Identification of genes differentially regulated in Corynebacterium diphtheriae by iron and DtxR

(Submitter supplied) We assessed changes in gene expression in response to iron availability for the human pathogen Corynebacterium diphtheriae. Expression profiles of wild-type C. diphtheriae strain 1737 grown in semi-defined metal-poor media (mPGT) in iron-limiting (0.5 µM iron chloride supplementation) and iron-replete (10 µM supplementation) conditions were compared; the expression profiles of wild-type C. diphtheriae strain 1737 during growth in iron-replete conditions was also compared against an isogenic ΔdtxR mutant grown in iron-replete conditions. more...

Organism:: Corynebacterium diphtheriae; Corynebacterium diphtheriae NCTC 13129

Type:: Expression profiling by array

Platform:: GPL25539
9 Samples

Download data: TXT

Series

Accession:: GSE119621

ID:: 200119621

Analyze with GEO2R

Select item 2000982023.

RNA-seq of pathogen Corynebacterium diphtheriae NCTC 13129 provides detailed insights into transcriptional landscape

(Submitter supplied) Background: The human pathogen Corynebacterium diphtheriae is the causative agent of the disease diphtheria. In the 1990s a large diphtheria outbreak in Eastern Europe was caused by the strain C. diphtheriae NCTC 13129. Although the genome was sequenced several years ago, not much is known about the transcriptome. Our aim was to use RNA Sequencing to close this knowledge gap and gain insights into the transcriptional landscape of C. more...

Organism:: Corynebacterium diphtheriae NCTC 13129

Type:: Expression profiling by high throughput sequencing

Platform:: GPL23376
7 Samples

Download data: XLSX

Series

Accession:: GSE98202

ID:: 200098202

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000255394.

Agilent-084856 Diphtheria array 084314 [Probe name version]

(Submitter supplied) See manufacturer's web site at http://www.agilent.com/ .

Organism:: Corynebacterium diphtheriae NCTC 13129

2 Series
1 Related Platform
18 Samples

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Platform

Accession:: GPL25539

ID:: 100025539

Select item 1000255385.

Agilent-084856 Diphtheria array 084314 [Feature number version]

(Submitter supplied) Arrays of this design have barcodes that begin with 16084856 or 2584856. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. more...