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Items: 10

1.

RNA sequencing based analysis of the bacterial transcriptome

(Submitter supplied) To investigate the architecture of the E. coli K-12 transcriptome, we used two RNA-Seq technologies to analyze strand-specific transcription at single-nucleotide resolution. We analyzed the data by using an organizational schema to annotate the promoters and terminators that define transcription units across the genome. We found substantial evidence for differential gene expression within complex operons, which we categorized based on operon architecture.
Organism:
Escherichia coli BW38028
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18814
8 Samples
Download data: WIG
Series
Accession:
GSE58556
ID:
200058556
2.

Illumina HiSeq 2000 (Escherichia coli BW38028)

Organism:
Escherichia coli BW38028
1 Series
8 Samples
Download data
Platform
Accession:
GPL18814
ID:
100018814
3.

rpoS_N_strv_TEX

Organism:
Escherichia coli BW38028
Source name:
Cell culture
Platform:
GPL18814
Series:
GSE58556
Download data: WIG
Sample
Accession:
GSM1413881
ID:
301413881
4.

WT_N_strv_TEX

Organism:
Escherichia coli BW38028
Source name:
Cell culture
Platform:
GPL18814
Series:
GSE58556
Download data: WIG
Sample
Accession:
GSM1413880
ID:
301413880
5.

WT_glucose_stat_TEX

Organism:
Escherichia coli BW38028
Source name:
Cell culture
Platform:
GPL18814
Series:
GSE58556
Download data: WIG
Sample
Accession:
GSM1413879
ID:
301413879
6.

WT_glucose_log_TEX

Organism:
Escherichia coli BW38028
Source name:
Cell culture
Platform:
GPL18814
Series:
GSE58556
Download data: WIG
Sample
Accession:
GSM1413878
ID:
301413878
7.

rpoS_N_strv

Organism:
Escherichia coli BW38028
Source name:
Cell culture
Platform:
GPL18814
Series:
GSE58556
Download data: WIG
Sample
Accession:
GSM1413877
ID:
301413877
8.

WT_N_strv

Organism:
Escherichia coli BW38028
Source name:
Cell culture
Platform:
GPL18814
Series:
GSE58556
Download data: WIG
Sample
Accession:
GSM1413876
ID:
301413876
9.

WT_glucose_stat

Organism:
Escherichia coli BW38028
Source name:
Cell culture
Platform:
GPL18814
Series:
GSE58556
Download data: WIG
Sample
Accession:
GSM1413875
ID:
301413875
10.

WT_glucose_log

Organism:
Escherichia coli BW38028
Source name:
Cell culture
Platform:
GPL18814
Series:
GSE58556
Download data: WIG
Sample
Accession:
GSM1413874
ID:
301413874
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Supplemental Content

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