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NC_012920.1(MT-ND1):m.3388C>A AND Mitochondrial non-syndromic sensorineural hearing loss

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Apr 1, 2012
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000022892.5

Allele description [Variation Report for NC_012920.1(MT-ND1):m.3388C>A]

NC_012920.1(MT-ND1):m.3388C>A

Gene:
MT-ND1:mitochondrially encoded NADH dehydrogenase 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Genomic location:
Preferred name:
NC_012920.1(MT-ND1):m.3388C>A
HGVS:
NC_012920.1:m.3388C>A
Nucleotide change:
3388C-A
Links:
OMIM: 516000.0016; dbSNP: rs387906730
NCBI 1000 Genomes Browser:
rs387906730

Condition(s)

Name:
Mitochondrial non-syndromic sensorineural hearing loss
Synonyms:
Deafness, nonsyndromic sensorineural, mitochondrial
Identifiers:
MONDO: MONDO:0010779; MedGen: C3151897; Orphanet: 90641; OMIM: 500008

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000044183OMIM
no assertion criteria provided
Pathogenic
(Apr 1, 2012)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Whole mitochondrial genome screening in maternally inherited non-syndromic hearing impairment using a microarray resequencing mitochondrial DNA chip.

Lévêque M, Marlin S, Jonard L, Procaccio V, Reynier P, Amati-Bonneau P, Baulande S, Pierron D, Lacombe D, Duriez F, Francannet C, Mom T, Journel H, Catros H, Drouin-Garraud V, Obstoy MF, Dollfus H, Eliot MM, Faivre L, Duvillard C, Couderc R, Garabedian EN, et al.

Eur J Hum Genet. 2007 Nov;15(11):1145-55. Epub 2007 Jul 18.

PubMed [citation]
PMID:
17637808

Novel mitochondrial DNA mutations responsible for maternally inherited nonsyndromic hearing loss.

Gutiérrez Cortés N, Pertuiset C, Dumon E, Börlin M, Hebert-Chatelain E, Pierron D, Feldmann D, Jonard L, Marlin S, Letellier T, Rocher C.

Hum Mutat. 2012 Apr;33(4):681-9. doi: 10.1002/humu.22023. Epub 2012 Feb 14.

PubMed [citation]
PMID:
22241583

Details of each submission

From OMIM, SCV000044183.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

In affected members of a family with maternally inherited nonsyndromic mild sensorineural deafness (500008), Leveque et al. (2007) identified a homoplasmic 3388C-A transversion in the MTDN1 gene, which was identified by whole mitochondrial genome analysis. The variant was predicted to not be pathogenic. Affected individuals had congenital to early adult onset of mild hearing loss associated with tinnitus and benign paroxysmal positional vertigo. Gutierrez Cortes et al. (2012) noted that the 3388C-A variant results in a leu28-to-met (L28M) substitution in a tyrosine-binding motif and a tyrosine kinase/phosphatase motif of the MTND1 protein. Cybrid cell lines carrying the mutation showed a 25% decline in mitochondrial oxygen consumption and a decrease of 55% in complex I activity compared to controls, indicating a defect in mitochondrial respiration. Complex I assembly, as assessed by gel electrophoresis, was also decreased (43% compared to controls), whereas other complexes were not affected. Reduced penetrance was observed.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Aug 18, 2024