2ABK


Conserved Protein Domain Family
Nth

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COG0177: Nth (this model, PSSM-Id:223255 is obsolete and has been replaced by 439947)
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Endonuclease III [Replication, recombination and repair]
linked to 3D-structure
Statistics
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PSSM-Id: 223255
Aligned: 70 rows
Threshold Bit Score: 178.53
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2ABK       1 MNKAKRLEILTRLRENNPHPTTELN------------------------FSSPFELLIAVLLSAQATDVSVNKATAKLYP 56  Escherichia coli
14600486  42 RDKISGEELLRLLRDNLRVDWREYValva-----------------yetDGNPFAVLAAVVLSQNTNDKNSIRAYLKLRQ 104 Aeropyrum pernix
16126511   7 LARSPLESVRDALLCEFGPQRPVAR-------------------------MDPISQLVKSSISGRTPDAVSWAAFLRLRA 61  Caulobacter crescen...
15807425  18 RPAEERAALLAWVKERLHEEYGDQDpt---------------------pRRDPMHELISTILSQRTTHADEEAAYQELRT 76  Deinococcus radiodu...
20093633  18 RRVNPVMEIVKHYEDHPIMKKLKVR-------------------------RDPFRALIQAIISQRTRDDVTDRVAERFLR 72  Methanopyrus kandle...
20094798   5 LEAPRIVERWLRGMEERGEYEPAWGd-----------------------REDVYSVALAGVLHQRTRRELAEPVLRELLR 61  Methanopyrus kandle...
18312246   3 ELIEIVDRYVELRLNEFIAPVVWRR------------------------EKNLFKMLVAVVLSQNTSDKNAFKALENLEK 58  Pyrobaculum aerophilum
15897075   1 -MKCTAETIFHKLSATYIIKEEDFIayyv-----------------wlkTKDCFKVLVATILSQNSTDKSAIKAYLELER 62  Sulfolobus solfatar...
15789648  24 ADPTQAALVVDRLGELYWQKTYGGR--------------------------AAFECLVRTVLSQNTSDKASQPAHDALMQ 77  Halobacterium sp. N...
14285602  96 KVPESFLPIYNRVRLMRSKVKTPVDamgcsmipvlvsnkcgipsekvdpKNFRLQFLIGTMLSAQTRDERMAQAALNITE 175 baker's yeast
2ABK      57 VAN---------TPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG-----------EVPEDRAALEALPG 116 Escherichia coli
14600486 105 TIGv--------TPEAILEASYDDLVEAIREAGLPRQKASALKALAEAVVRWGGEnyl-----lkaPPEELREKLMSIRG 171 Aeropyrum pernix
16126511  62 EFK---------SWEDLAEAKTARVAMAIQDVTFPEDKARRLITALRMIEEKVGWlslsh--lktlEVDQARWELQALPG 130 Caulobacter crescen...
15807425  77 LGD----------WDAITLAPTDAVAHAIRRSNYPESKAPRIQETLRRIKAAPGGydldf--lrdlPVKDALKWLTDLPG 144 Deinococcus radiodu...
20093633  73 KFK---------TPKDVAEVNLKDLVETLRDAGLYRQKAKMIKECCERILADGLDleei----vqkPTEEARRELMRLPG 139 Methanopyrus kandle...
20094798  62 RYP---------EPSDLLKAPEDELKESLARIGLVERRLKAVLGLARLLSEDPEP-------------SGED--LLSVPG 117 Methanopyrus kandle...
18312246  59 QVGt-------iTPQALLELPIEALEELIKPAGMYRQRARNLKALAEAFIQLGLTperl----vemGPERARELLLSLPG 127 Pyrobaculum aerophilum
15897075  63 KVGv--------TPEKLSNANLADIESALKISGLYRTKAKRLKEISRIILERYNGlid-----sllNTSNARDELLKLEG 129 Sulfolobus solfatar...
15789648  78 RYGaaa----ddLAAALADADQDVLADTISMAGLYNQKSATIIRIADRVCEEYGGadgfdafvregDPDAVRAALLDMTG 153 Halobacterium sp. N...
14285602 176 YCLntlkiaegiTLDGLLKIDEPVLANLIRCVSFYTRKANFIKRTAQLLVDNFDS-----------DIPYDIEGILSLPG 244 baker's yeast
2ABK     117 VGRKTANVVLNTAFGWP---TIAVDTHIFRVCNRTQFAP---GKNVEQVEEKLLKVVP--AEFKVDCHHWLILHGRYTCI 188 Escherichia coli
14600486 172 IGPKTADVFLSLVRKAPg--VFAVDTHAARVARRWGLVGe--KAGYDEISKALYNYFG--PGNSEEAHRLIIALGRTYCK 245 Aeropyrum pernix
16126511 131 VGVKVAACVLNFSDLAMr--ALVVDTHVDRVARRIGLVGsgdTTNTYHTLMAMAPASWtaDDLFELHWLMKRGLGQMLCG 208 Caulobacter crescen...
15807425 145 VGVKTASLVLLFNYARP---VFPVDTHVHRVSTRVGVIP---RMGEQAAHRALLALLPpdPPYLYELHINFLSHGRQVCT 218 Deinococcus radiodu...
20093633 140 VGPKTADVVLLFAGGHD---VCPVDTHVARVSRRLGLTD---SKEYFEVQEAVHEMVP--EGERGKAHLALIQFGREICR 211 Methanopyrus kandle...
20094798 118 VGPYTADLVRAVVYRER---VLPVDANVRRVVRRSTGRP----VGDVGAEWVRAARDP------RDLALGTVELGRRCCR 184 Methanopyrus kandle...
18312246 128 VGKKTADVVLVN-LGLP---AFPVDTHITRIAKRWGIG-----EKYDEISRWFMERLP--RDKYLDFHLKLIQFGRDVCR 196 Pyrobaculum aerophilum
15897075 130 IGEKTADVVLLTCYGYYgykVFPVDTHITRVSKRLGIVPt--NAKYSLISSTLKELFS--AYDLLHLHHMLIAHGRQTCK 205 Sulfolobus solfatar...
15789648 154 VGPKTADCVLLFAGGAPg--VFPVDTHVHRIARRMGIAPa--AADHEAVRAALEAAVP--DAACGFGHTAMIQFGREYCT 227 Halobacterium sp. N...
14285602 245 VGPKMGYLTLQKGWGLIa--GICVDVHVHRLCKMWNWVDpikCKTAEHTRKELQVWLP--HSLWYEINTVLVGFGQLICM 320 baker's yeast
2ABK     189 ARKPRCGSCI----IEDLCEYKEKVDI 211 Escherichia coli
14600486 246 ARRPRCRECP----LRSVCPSAQ---- 264 Aeropyrum pernix
16126511 209 AEAPKCGACP----VKQMCAKAGVGHS 231 Caulobacter crescentus CB15
15807425 219 WTRPKCGKCI----LRERCDAYALYGD 241 Deinococcus radiodurans
20093633 212 PRKPQCELCF----VRRFCPYGGEQA- 233 Methanopyrus kandleri AV19
20094798 185 P-EPECEECP----IAGVCAEQGRVRG 206 Methanopyrus kandleri AV19
18312246 197 ARNPKCGQCP----IGAKCPSFKSAGR 219 Pyrobaculum aerophilum
15897075 206 ARKPLCNSCI----IKECCEYYSHRDG 228 Sulfolobus solfataricus
15789648 228 ARDPACLDDPaacpLAEHCDRVGVDAA 254 Halobacterium sp. NRC-1
14285602 321 ARGKRCDLCL----ANDVCNARNEKLI 343 baker's yeast
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