1PPX,1TUM


Conserved Protein Domain Family
MutT_pyrophosphohydrolase

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cd03425: MutT_pyrophosphohydrolase (this model, PSSM-Id:239517 is obsolete and has been replaced by 467531)
Click on image for an interactive view with Cn3D
The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.
Statistics
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PSSM-Id: 239517
Aligned: 115 rows
Threshold Bit Score: 114.511
Created: 12-Sep-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1TUM; Escherichia coli MutT binds AMPCPP (a non hydrolyzable substrate analog), Mg2+, and Co2+; defined at 3.5A contacts.
    View structure with Cn3D
  • Citation:PMID 9063868
  • Structure:1PPX_A; Escherichia coli MutT binds 8-Oxo-dGMP and Mg2+; defined at 3.5A contacts.
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #                               ## #           #  ##                      #   
1PPX_A              4 LQIAVGIIRNEnNEIFITRRAadahmaNKLEFPGGKIEMGETPEQAVVRELQEEVGITPqhfsLFEKLEYEFpdRHITLW 83  Escherichi...
1TUM                4 LQIAVGIIRNEnNEIFITRRAadahmaNKLEFPGGKIEMGETPEQAVVRELQEEVGITPqhfsLFEKLEYEFpdRHITLW 83  Escherichi...
BAC88810            3 KAIAIGIVCFA-GKVLIDRRPvdaalgGLWEFPGGKILPGETPEACVAREVLEEVGLTVtvgeLLAILEHDYsdFFVRIR 81  Gloeobacte...
AAS94765          236 LDVVSGVLVHE-GRIFVQRRPdtgvwaGFWEFPGGRIEPGETPEEAIIREFREETDFAVrptdKLAVIRHGYttYRVVLH 314 Desulfovib...
ZP_00671439         6 KLIGVAVIWDEtGKILIDKRRlgdsfgGLWEFPGGKKEAGETIENCIKREVLEELGIEVavekHLITIEYNYseIRLILH 85  Trichodesm...
jgi:PMN12a_1205   251 QEIGIGLVFNQkGELLIDQRLenssmgGMWEFPGGKKIPNESIVKTIERELKEELGIVVnvgeKLLSFEHAYthKRLNFT 330 Prochloroc...
ABB25118          213 QVIGIGVVINEaGDVLIDQRLeegllgGMWEFPGGKQEPDEPIEACIVRELMEELGIKVsvgeGLITVDHAYshKKLQFV 292 Synechococ...
jgi:Dde_0212      233 IEVATGFLVHQ-GRIFIQKRPemgvwaGFWEFPGGCIEQGETAEEAVRREFMEETEFDVvpreKIAVVRHGYttYRATLH 311 Desulfovib...
REF_tigr:SRU_2119 221 EDIAVGLVFDDnDRLLIQRRPdegllgGLWEFPGGKQEGDESMEAACRREVREELGVGMtdvePFYTLSHAYshFKITLH 300 Salinibact...
ZP_01006407       265 AVIGVGLILNKnQDVLIDQRLdegsmgGMWEFPGGKKEKDESIEMTIARELREELGVEVkvgkKLIEFDHSYthKKLHFI 344 Prochloroc...
Feature 1                                  #                    #        
1PPX_A             84 FWLVERWEGEpw-------gkEGQPGEWMSLVGlnaddfppANEPVIAKLK 127 Escherichia coli
1TUM               84 FWLVERWEGEpw-------gkEGQPGEWMSLVGlnaddfppANEPVIAKLK 127 Escherichia coli
BAC88810           82 AYLCHSESDAar-------aiACDAVEWVEPREldgytfpvANAPLIPLIQ 125 Gloeobacter violaceus PCC 7421
AAS94765          315 CYLLHIDASSrsappehpvitAATDHRWATLADidaltlpaGHRKLADLLA 365 Desulfovibrio vulgaris subsp. vulgaris ...
ZP_00671439        86 VYHCRYLRGIpk-------aiECDEFRWVTLDEidrftfpeANEQIITALK 129 Trichodesmium erythraeum IMS101
jgi:PMN12a_1205   331 VHICAWISGQpk-------plASQKLLWVSPDKlfdfpfpaANTKIISELH 374 Prochlorococcus marinus str. NATL2A
ABB25118          293 VHLCRWISGEpq-------plASQQVRWVRPEQlkdypfpaANGRIIEALL 336 Synechococcus sp. CC9902
jgi:Dde_0212      312 CYLLELRGGSdvp-----vlhAATESRWVRFAEldgytlpaGHRKLVDMMA 357 Desulfovibrio desulfuricans G20
REF_tigr:SRU_2119 301 AFRGRLADGPpe-------arEDQPFRWVTVDElddyafprANRRLIEELV 344 Salinibacter ruber DSM 13855
ZP_01006407       345 VHLCELISGKpk-------plSSQEVRWVKLSDlqnypfpkANSYMISALK 388 Prochlorococcus marinus str. MIT 9211

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