Conserved Protein Domain Family
RND_mfp

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TIGR01730: RND_mfp 
RND family efflux transporter, MFP subunit
This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate]
Statistics
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PSSM-Id: 273776
Aligned: 19 rows
Threshold Bit Score: 279.2
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAC14594      36 VTVVTLKSETVGLTRELPGRTNAFLVAEVRPQVNGIVAKRLFTEGGMVKAGEPLYQLDDASYRAqannaraQLARAEATA 115 Stenotrophomona...
AAK88810      89 QEIATIGTRPMAERLSISGELQPVNRVLIRAREAGKILEMNVREGQAVRAGDMLVRFETDELQStlllrqsDRDAAEAEL 168 Agrobacterium t...
AAM41428      44 VETAKAARRAVAASYTGTAALEPRAEAQVVAKTSGVALAVMVEEGQKVSAGQALVRLDPDRAHLa-------VAQSEAQL 116 Xanthomonas cam...
ZP_00117414   44 VSVIAVEEKPLNSSFQLPASLDPIEESKIAVTVAGKITRLSIENGSRVSKGQVIGTIDSQLKQL-------NLEAVELSE 116 Cytophaga hutch...
ZP_00003661   44 VSVITAEQISMEVREETIGSLEGMMDPTVAAEVSGRVLKVLVRQGQHVKKGQEIALLNPVDYQLqrrealsEVARLEALL 123 Nitrosomonas eu...
AAF83057      36 VKLETAGAETLAKTQ-FVASVRQEQRADLAFENGGRIAAISVDVGNKVRHEQVLARLDREPVRLklqqaeaTLRAATAQL 114 Xylella fastidi...
AAM87305       4 VKIFMVEDSGQNGTRYFPARLQAGDETQLSFKRGGQLQELLVREGEQVKKGQKIAMLNDTDLSLr-------VRDRQSTF 76  Yersinia pestis...
WP_001044377  33 aKLTTVSVGNNTFSRQFPATTAAGDRAVLAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALle-------qQANANF 105 Vibrio cholerae
WP_010880852  32 vsvvevkrekvvvSVPFKGVLKAVKEAELSSQEPGVLTRLYKREGEYVKKGEVLAQVESNLAKEsyrkvlnQLKEVEKQV 111 Aquifex aeolicus
EEY03892      43 VVVAAAGEETINNRLTAIGSARALSTVSVTPYSSGYMTKLHVRAGDTVKEGDLIAELDAETEQIa-------VAKAETAL 115 Brucella neotom...
CAC14594     116 NAARLSAKRITELAKVDAVSQQDLENAVAAQKQAEADVGaakasldAANVTLGYARITAPISGRIGKSSVTQGALVSAGq 195 Stenotrophomona...
AAK88810     169 MLAMQALARTEQLAAKNIASTEQLDKAKSDVVVKTTRVQslssqvdIARLALRNAEIRAPFDGTVTRRVAETGARIGAD- 247 Agrobacterium t...
AAM41428     117 RKLENSYRRATQLVGQQLVSAADVDQLKFDVENSRAQHR-------LASLELSYTTVQAPISGVIASRSIKTGNFVQIN- 188 Xanthomonas cam...
ZP_00117414  117 AKLKRDYERTKELYEGKAATETNVIDAKYAYDNKRIEAd-------QIRKQIADGNIIAPFSGIISNKSLNVGEFTNVG- 188 Cytophaga hutch...
ZP_00003661  124 ENQQRSVERNARLVERNFISQIVLDDVKTQEIALRRQLEgaksrlaSIEHNQSKTRLLSPVDGTVESRLVAEGDYVKVG- 202 Nitrosomonas eu...
AAF83057     115 HERQTQLNQQQAMFKEAMVSQAALTSAQVALDAAQADLHvaesnhaLAKRALRQSELRAPFDGSVVARLLQPQADTAPG- 193 Xylella fastidi...
AAM87305      77 NLARDQFNRFNTLQGRSAVSRADLDIRRAEMESAQAal-------dIARKELSDATIIAPFDGIIANVNVRNHQVMAAG- 148 Yersinia pestis...
WP_001044377 106 QLADVQFQRAQRLRQDKVVSEQDFDQAQANHNSAkat-------weQAKANLRYTQLIAPYDGTISLIPAEQYEYVAAK- 177 Vibrio cholerae
WP_010880852 112 ELQKKIYERRKKLFERELISKEEYEREKYKLEELIQRKKaleselkYFKEKVRRHYVRAPFDGYITERYKNMGDYVTPQ- 190 Aquifex aeolicus
EEY03892     116 KDAQTTRQRIARLRATNTATEVQAVGAELAVANAQLal-------qDAQLALSRRMVRAPITGIVGILPVNAGNYVTAQ- 187 Brucella neotom...
CAC14594     196 aNALATVQQLDPIYVDLTQSSAELLQLRR-ElaagrlqdnqtLPVSILMEDGstFEHKGTLEFSEVSVDPTTGSFGLRVK 274 Stenotrophomona...
AAK88810     248 -GELLTLVDTSELEAKVLVATRDIPRVAR-Gq---------tAELEIDGLAG--QIVKGTVERISPVAEDGTRVVAVYLR 314 Agrobacterium t...
AAM41428     189 -TPIFRIVDDSQLEATLNVPERELATLKS-Gq---------pVTLLADALPG--QQFVGKVDRIAPVVDSGSGTFRVVCA 255 Xanthomonas cam...
ZP_00117414  189 -TVIATVVNIQKLKAVVYVNEKDAYRLQN-Gq---------nVSVSTDVYPG--QEFKGKISFISPKGD-AAHNYLVEVL 254 Cytophaga hutch...
ZP_00003661  203 -DPLFQIISNQRLRAHLPFPESIASSIRP-G-----------LEVRLNTPTSs-VEIVSRIRELKPAIGAGNRAIDVLAD 268 Nitrosomonas eu...
AAF83057     194 -QTVLQIEGRGRLQAVATLPAEIAQALSP-Nk----------VIQGNRTDTPq-ASISLRLRSVSPRLESGASLQAIF-D 259 Xylella fastidi...
AAM87305     149 -QPVATLSALDTLDVVFSVPERLFTTLDI-Snrn------ykPTVLLNHMPG--REFIAEYKEHTTSTTSASQTFQVTLT 218 Yersinia pestis...
WP_001044377 178 -QGVMNIQTNQLLKVQFLLPDHLLNRFSRdGv---------eAHMVFDSFPN--RQYPLQFQEIDTEADSKTRSYKVTMV 245 Vibrio cholerae
WP_010880852 191 -TPVFRLINLGELEFSFKVPARYVSLLKK-Gk---------eLNVEL--ENG--KNVKGRVYFISERGDENN-QFLVKLL 254 Aquifex aeolicus
EEY03892     188 -TSIARIDDRSTVLIDIWVPERFAPQIKV-Gq---------pLTAESTAFPG--EIYKGRINAVDNMLDEASRTLHVRAE 254 Brucella neotom...
CAC14594     275 VDNP-DGLLMPGMYVRAVIGGGVRSD----AVLVPMQGIARDPKGd---TTAMVVGKd---NKVEVRPVKVSRT-VGD-K 341 Stenotrophomona...
AAK88810     315 LANR-DGQLWGGMFAGGSILLREKND----ALVVPAIALRKDETG----YHVLKIQD----GHLRRQTVAVGPRwNGGsL 381 Agrobacterium t...
AAM41428     256 FGAG-AEALQPGMFGRIRIDYDQRKD----ALVIPRLALLDDGE-----PAVFVVRN----GKASRVPVKLGYA-EGP-W 319 Xanthomonas cam...
ZP_00117414  255 IDNNgKNILKAGTYVLVKFRSESTAS----VIQIPKIALAEGLKN----PYVYVVNG----NKVASRKIITG-R-EVGeY 320 Cytophaga hutch...
ZP_00003661  269 VED--QPGWHTGASVSGVVVLGVREN----VVVVPEQSVVLRPAG----EVVYAISQd--qAQAHQRVVRTGLR-QDG-M 334 Nitrosomonas eu...
AAF83057     260 VTET-TTPLHSGDTLLLALSATATP-----ALSVPLPAVIPGLNGn--sGIVFVYQPk--tGVVLRRDVTLGM--IEGeR 327 Xylella fastidi...
AAM87305     219 MKRPaDMPLLSGISGRVRINSGNLSGtdhpTIIVPVEAVFNPDHAqlndARVWVIKNdndqMHVEERKVQVGQL-VEN-G 296 Yersinia pestis...
WP_001044377 246 MERPnDVGILPGMAGRVSLMAPS-GS----ATVIPTSALFAEQGG----KYVWRVDEa---GLVSKAAVTLNE------Q 307 Vibrio cholerae
WP_010880852 255 INNE-EGKLKAGTFGFAEVPVREVY-----AFKVPEDAVILQGNK----KIIWVLEG----NRVRSREVEVIFI-NGG-Y 318 Aquifex aeolicus
EEY03892     255 VPNA-EDRLRAGMSFSVTILFPGD-N----YPSVDPLAIQWGADG----SYVWRIEN----GIAKKIPVRIVQR-SSD-N 318 Brucella neotom...
CAC14594     342 WLVEDGLKAGDKVIVEGLQKIGPGMPVKAT 371 Stenotrophomonas maltophilia
AAK88810     382 IEIGAGLADGETILTVPLPELRPDMAVTID 411 Agrobacterium tumefaciens str. C58
AAM41428     320 LEVRQGLKEGDQVVTAGKVALRDGTAVQII 349 Xanthomonas campestris pv. campestris str. ATCC 33913
ZP_00117414  321 VEVVSGLKTGEQVVINGQINLTNGSIISIV 350 Cytophaga hutchinsonii
ZP_00003661  335 VEIIDGIQAGEQIVLDGAAFLTDGARISVQ 364 Nitrosomonas europaea
AAF83057     328 MQICSGLKPGEQVVVAGAAFLSDGQKVLPF 357 Xylella fastidiosa 9a5c
AAM87305     297 IQVTSGLADGEQIVAAGTGELRPQQVVRAW 326 Yersinia pestis KIM10+
WP_001044377 308 RQVLTGLNDGDRIIISGVSGVTEGIKVREW 337 Vibrio cholerae
WP_010880852 319 AYVEGDLKDGDKVVTENTFLLKEGAEVVVR 348 Aquifex aeolicus
EEY03892     319 ILIDGPVKRGDMIVTQGVQTVRDDAPVRVk 348 Brucella neotomae 5K33
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