Conserved Protein Domain Family
truA

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PRK00021: truA 
tRNA pseudouridine(38-40) synthase TruA
Statistics
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PSSM-Id: 234577
Aligned: 829 rows
Threshold Bit Score: 141.433
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
148284891   2 LRYKAIVEYDGTNFVGWQRQqn--glSIQQLLEDKISTFTk-qTVN---LIAAGRTDAGVHALGQVV------HFDliap 69 
170761947   1 MNYKISLRYDGSLFYGWARQpq--krTVQGDLEEIFKSIF---KINnirIIGSGRTDKGVHAYEQTF------SVK---- 65 
83320035    3 TGILLTLCYDGSNYHGWINQtn--siSTQTVLNKAIKKVI---KTSefkTIGASKTDANVHALDQKV------LLI---- 67 
162446996   1 MRYKAIFSYDGTNYSGYQKQin--qlGIQTVIEKAFRLMTq-iDIE---TFAASRTDKGVHALHQVL------HFD---- 64 
26554422    1 MTYKLKISYDGSFFRGYAKQkdenliTVQSELEKYLSLFFn-tKIS---TFGSGRTDKYVHAIDQTVsfkcdsDYD---- 72 
42561241    3 TGILLSLCYDGSNYHGWINQtn--aiSIQTTLNKAIKKVI---KTGqfkTIGASKTDTNVHALDQKV------LLI---- 67 
209554225   1 MNYKISIRYDGSLFYGWAKQpq--krTVQEHLETVFKTIFkinDIK---IIGSGRTDRGVHAYEQVF------SVN---- 65 
12045035    2 ARYLGIVSYDGSYFKGWAIQpn--laTIQGLLEQSFSLIIg-rKIK---VIGSGRTDKGVHAINQTF------HVD---- 65 
13358100    1 MNYKISLRYDGSLFYGWARQpq--krTVQGDLEEIFKSIFkinNIR---IIGSGRTDKGVHAYEQTF------SVK---- 65 
13507935    2 PRYLAIVAYNGAPFRGWAKQpg--yhTVQGQIEQNLALIYq-tPIN---IYGSGRTDKGVHAINQTF------HVD---- 65 
148284891  70 nnskdlacinketdnkevskqnnttttidslkkmLPCr---yNAYKLMSAVNYLLk--PHRIILTSCEITTLQFHARFSA 144
170761947  66 ----------------------------------HSAlk--yDSHIIYQALCSRT---SSDIQILEVQKVDDSFHAQYNA 106
83320035   68 ----------------------------------IYFt---pILEKFINAINKAL---PEDIRILNAKFVDPNFNIR-EV 106
162446996  65 ----------------------------------SDIe---lTSDQWVDALNKRL---PTDIRLMKVTPVKDNFHARHSA 104
26554422   73 ----------------------------------PK-------------SIQNFLnskLTNIYVNSIEKVPNSFHARFSI 105
42561241   68 ----------------------------------IYFt---pILEKFIKAINKAL---PSDIKILDAKFVDPNFNIR-EV 106
209554225  66 ------------------------------------HhqlnyEPQVIYQALCSQI---DPDVQILKVQSVHDTFHAQHDA 106
12045035   66 ----------------------------------INGe---iNLNLLIRKINQLI---KPHCIVKTLVLVNDSFHARFQV 105
13358100   66 ------------------------------------HsalkyDSHIIYQALCSRT---SSDIQILEVQKVDDSFHAQYNA 106
13507935   66 ----------------------------------LPDk---lPLKQLIAKLNQLN---YPDIFVKALVPVAPRFHARFAV 105
148284891 145 KARHYKYRIINRTVPSVIEQNRTWWIKPP----LNVIDMIDASQHLIGKHDFTSFRSSACQAKS---PLKTLTKIEVdT- 216
170761947 107 TSKTYQYVINDYEF-DLFRNNYELFVNQK----INDQKILEALELFVGEHDFKSF--STSELTM---TIRRINWVKI-K- 174
83320035  107 DYKIYNYYINDHKFDIFTNRYEYFWKHSK----IDILKLQEIFNLFIGEHEFKLFSGLKENEWDnyqTKRIIDDIKV-L- 180
162446996 105 KSKRYIYKIAKQPS------TVFRGNHELyvkhFDIDLVKDHLHTIVGTHDFSGF-SPNKEHKP---PIKTIYSFDY-K- 172
26554422  106 KSKTYMYVINTGEF-DVFKQRYEYQYNKS----IDIKKCEDIINLFIGTKDFLSF--STSKLEN---TTRTIRWIR--Ii 173
42561241  107 EYKIYHYYINDHQFDIFTNRYEYFWKHQK----IDIIKLQEIFNLFIGEHEFKLFSGLKENEWNqyqTKRTIDDIKV-L- 180
209554225 107 ISKTYQYIINDYEF-DLFKHNYEYFIHQK----INDQKLLEALELFVGEYDFKSF--STSELPL---TTRKINWVKI-T- 174
12045035  106 KTKVYEYLINCGNL-NPLQFNYVWQLNQQ----LDLEKLKADATLFLGKKNFLSF--SSSIHTD---SIRTISKITI--- 172
13358100  107 TSKTYQYVINDYEF-DLFRNNYELFVNQK----INDQKILEALELFVGEHDFKSF--STSELTM---TIRRINWVKI-K- 174
13507935  106 KTKVYEYLINTRAF-NPAQYHTVWQYNHP----LDLAQLEADTTLFLGRKDFWSF--STASQKD---TQRTISKIIV--- 172
148284891 217 ----TNY----PE-IQIYFSAPSFLHHMVRNIVGTLVYIGLCK-ISPAAIKTILFAKNRAMAGP-TAPSSGLYFVKVDY 284
170761947 175 ----RDT-----H-LIIYINANGFLKNMVRMIVASCLDYAFNK-ISLAKIHELLIYPKKGASIK-LAPACGLYLYKVYY 241
83320035  181 ----RIN----NK-VVIQFKATGFIRYQIRIIIANCLNAYLNYkVNINTLTEMLQGIGKK--TPfIIKAKGLVLQEIKF 248
162446996 173 ----ETK----TH-YIFSIHGNSFLRYMVRIIMGNVIAVATNK-KPQNQLEILLETKNRELSAK-TADAKGLYLKHIYY 240
26554422  174 kknkK---------IYIFINGEGFLRNMVRMIVGIILTYCENK-ITYQEVLDLFKNPKKGSAVI-KVPGCGLYLYRTIY 241
42561241  181 ----RIN----NK-VVIQFKASGFIRYQIRIIIANCLNAYLNHkISTTKLVEMLQGIGKK--TPfIIDAKGLVLQKIQF 248
209554225 175 ----RN------TrLEIYINGNGFLKNMVRMIISACIDYVFNK-ISLTQIKTLLTNPKKGASVK-LAPPCGLYLYKVYY 241
12045035  173 ------QketnQL-VRLTFFGSGFLRSQVRMIVACLVNLNTNK-MALETVAKLFEHPKKGSCVV-KAPSCGLYLKTVVY 242
13358100  175 ----RD------ThLIIYINANGFLKNMVRMIVASCLDYAFNK-ISLAKIHELLIYPKKGASIK-LAPACGLYLYKVYY 241
13507935  173 ------QqdhtGT-VKLTFFGNGFLRNQIRMMVASLVALNNRT-LMRETVQQLFDQPQKGGCKV-KAPACGLYLKTVLY 242
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