Conserved Protein Domain Family
PerM

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COG0628: PerM (this model, PSSM-Id:223701 is obsolete and has been replaced by 440393)
Predicted PurR-regulated permease PerM [General function prediction only]
Statistics
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PSSM-Id: 223701
Aligned: 128 rows
Threshold Bit Score: 92.6997
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16262524 123 FAR---GSAAAAQPSRLPTLVATAAAVAVLYFARDVFLPLAIAILLTFALAPLVSRLRRVG-----------CPRSVAVI 188 Sinorhizobium meliloti
15613026   1 ----mnHPTLLLIARLLIVALLIATGLYALYFFLSLTYPFLIAALLAFFMNPIVNTLEKDIr----------LPRPLAVL 66  Bacillus halodurans
15615171   1 -------MSAIFTKRNVLIALTILILVIAAYFILPVSLPLVAALITAMILSPAVHYLHVKTk----------LKRNFSVM 63  Bacillus halodurans
8928522    1 ----mnQSYITIFFRTLFVISMTAGSIAAAYYSFPLTYPFLIALILSSVIHPVVDYLDKVTg----------FPRTINVL 66  Bacillus subtilis
15792686   1 ----------MQNGKFFLISFILVILFLLLYLFKGFLLVIIIASLMAVATSNINAKFLNLTk---------gHKFLASIL 61  Campylobacter jejuni
8928454    1 -----------MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFf-----------nVVSSFL 58  Helicobacter pylori
8928492    1 -----mNTEFTLTQKRALAILTLIALLFGAYFLRNYFVLIVVAAVGAYLFTPLFKWFTKRFn-----------tGLSAAC 64  Mycobacterium tuber...
8928492    1 -----mNTEFTLTQKRALAILTLIALLFGAYFLRNYFVLIVVAAVGAYLFTPLFKWFTKRFn-----------tGLSAAC 64  Mycobacterium tuber...
8928462   11 SLFvllALMFVLVCMLFVPYLTVLLWSSILAILLSPCYRALCARIDMHAFTRTRHLVSHMNgedgctaaitrATRFQKKM 90  Treponema pallidum
8928476    1 -----------MKAQYFFWILFLIGFYWMLYLYQDFLMDALIAGLLCVGLFQVKVFLNKRFs-----------nVISSFL 58  Helicobacter pylori...
16262524 189 GTVTTAFLFLSAFGVVIAM---QVSEVAQNLPTYQYNive---kvrTLKETGSESQILERIGRVIER-ISTEISRPEPev 261 Sinorhizobium meliloti
15613026  67 VSLLLLFGLIGGLVTIMIVkmiDGFRYLSLMVPTQIEris---mtiQNYVNEQILPLWNQGLGLIDRlEPSQQRALEEgi 143 Bacillus halodurans
15615171  64 VVFTLFVCLIGLCGYYVVT---TVITQGVTIVENIPQyind-inraWLLFQRDLEHRYEDLPPEFVYeINLQVTDTLNkl 139 Bacillus halodurans
8928522   67 GVLAFFLLAAFGVLTILVA---EIVTGTAYLAKTLPPhistfisycEKLFTTHIQPLYNELTLLFQElETNQQASIVThi 143 Bacillus subtilis
15792686  62 TTTCMVLLFFAPFVYAMIE----LAKALKNFDINLVT-----------QTLDYVKNYQFTLPESFNFlEPKIKEFLASi- 125 Campylobacter jejuni
8928454   59 CVLILASVLIVPLy--------FIVYKSSNIIFEINFe--------KF--SALIKWLKGIITENLSH-FPTIHDGASKfl 119 Helicobacter pylori
8928492   65 TLLSALAAVVVPVGALVGLaivQIARMVDSVADWVRTt--------DL--STLGDKILQFVNGLFDR-VPFLHITVTAda 133 Mycobacterium tuber...
8928492   65 TLLSALAAVVVPVGALVGLaivQIARMVDSVADWVRTt--------DL--STLGDKILQFVNGLFDR-VPFLHITVTAda 133 Mycobacterium tuber...
8928462   91 LAAVFSLVITLLVTTVFFFiaiSLFGQGKLLFDKLSLffr----eyDLFEGAKQRSFTALIFKLSRGtVDISTLNVEEhl 166 Treponema pallidum
8928476   59 CVLVLASVVIVPLy--------FIVYKGSNVIFEINFe--------KL--SALIKWLKGTITENLSH-FPAIHDGVSKfl 119 Helicobacter pylori...
16262524 262 raspeptpetkpllVEIFSPQRPIETLKNIINP--------LLGPLATTGLVIVVVIFMLLEREELRDRFIRLVGYGDLH 333 Sinorhizobium meliloti
15613026 144 -------------qQLGGQLASLLGNLGQAIANglshivsaLPLTLTVVVFIILGLYFISKDWNKFKMAARTRLPFIVRR 210 Bacillus halodurans
15615171 140 --------------rQDLADRDWIGDITSLVTS--------VPGYLVTIIVYLIALFLFMLELPRLKEKVYSYLSEKTQD 197 Bacillus halodurans
8928522  144 qt---------lgdSAAKNAGLLLSHILEMIPRff----alLPNTAAVLIFSLLATFFMTKDWHKLKAMLVLILPDRVTA 210 Bacillus subtilis
15792686 126 --------------DLNSISKQILSYASSFTKS--------GAKFLIDMVLICVFYFFANLYGTELVIYLKSIIPIDKKE 183 Campylobacter jejuni
8928454  120 -------------eN-FSAASITGYLLKISSYvg-----rySLKLITDALFILGLLFFFFYYGERFYRYFLGVL-PLGMN 179 Helicobacter pylori
8928492  134 l-----------rkAMISVAQNVGEWLLHFLRda-----agSLAGVITSAIIFVYVFVALLVNREKLRTLIGQLNPLGED 197 Mycobacterium tuber...
8928492  134 l-----------rkAMISVAQNVGEWLLHFLRda-----agSLAGVITSAIIFVYVFVALLVNREKLRTLIGQLNPLGED 197 Mycobacterium tuber...
8928462  167 ------------lrFFGKHVESVFVYTQIFVKN--------IARAALSTLFFSFTLYFFFLDGEHLSCLLIAALPLRKRA 226 Treponema pallidum
8928476  120 -------------eN-FSAASITGYLLKVSSYig-----kySLKLVTDALFILGLLFFFFYYGEKFYRYFLGVL-PLEMN 179 Helicobacter pylori...
16262524 334 RTTEALQDAGARVGRYLLMQLVVNITYGIPLAIGLSLLGI-PNAVLWGMLAIVLRFVPYIGPVIAAALPLFLAFAAAPgW 412 Sinorhizobium meliloti
15613026 211 RTLDVIKDLKTKVFGFITAQVILISLTALINFIGLLVLQV-EHPFTIALIIGLVDLLPYLGTGIILIPWGIYSIVTGN-- 287 Bacillus halodurans
15615171 198 KVSFMsSRLSYVVSGFIKAQFLVSIIIFVVSLVGLLLIVP-EYALLMAFVIWIIDFIPIIGSIAILGPWALFQLIAGN-- 274 Bacillus halodurans
8928522  211 NSKAIsSELKKAMTGFIKAQAVLVFITMVIVFIGLSLLKV-EHAATIAFLIGLVDLLPYLGAGSVFVPWILYLSITGQ-- 287 Bacillus subtilis
15792686 184 LDDVL-SEVGNVMAVVLYSMVIVAIFQGALFGLITIFYGY--DGILMGVIFAVSSLIPAIGGALIYMPVSLYEFASNNlN 260 Campylobacter jejuni
8928454  180 QSKKIFEEVAGILRIVLLTSLITVILEGVA--FGVMIVWFgHDGWSLGILYGLASLVPAVGGALIWIPIAIYELYHGNvN 257 Helicobacter pylori
8928492  198 VTDLYLQKMGSMVRGTVNGQFVIAACQGVAGAASIYIAGFhHGFFIFAIVLTALSIIP-LGGGIVTIPFGIGMIFYGNiA 276 Mycobacterium tuber...
8928492  198 VTDLYLQKMGSMVRGTVNGQFVIAACQGVAGAASIYIAGFhHGFFIFAIVLTALSIIP-LGGGIVTIPFGIGMIFYGNiA 276 Mycobacterium tuber...
8928462  227 SAQLL-EKCKEATRHLFKGLFSIAFYQTCVAFVFYGIFRV-EGPMALAMLTFFASFLPLVGCACVWLPVGISIGFTSG-W 303 Treponema pallidum
8928476  180 QSKKIFEEVAGILRIVLLTSLITVILEGVA--FGTMIIWFgHDGWSLGILYGLASLVPAVGGALIWIPIAIYELYHGHvN 257 Helicobacter pylori...
16262524 413 SLLVWTAALFIVLELLSNNVVEPWLYGSRTG--------LSPLAIIVAAIFWAWLWGPVGLVLSTPLTVCLVVLGRHVPQ 484 Sinorhizobium meliloti
15613026 288 LFLGVGLLALYGLTVLIRQLAEPKVLSSSLG--------LNPLATLISLFAGLQLFGVLGLVIGPVLLVLLLSLYQANVL 359 Bacillus halodurans
15615171 275 VAVGTQLLILAAILLIIRRTVEPKVMGQHIG--------LSPLATLIAMYIGLMLFGVVGFIVGPLIVIAFQSAKEAGII 346 Bacillus halodurans
8928522  288 LPQAIGIGILYLVVLIQRQLTEPKILSKSIG--------IDPLATLIALFAGFKLFGFLGLIAGPAVLVIIQAFITTGAL 359 Bacillus subtilis
15792686 261 SALVIFIYSVIVISFIADTLIKPLIIKWINKklvktptkINELLIFLAMIAGISTFGFWGIILGPAILTFFVSTLRMYVI 340 Campylobacter jejuni
8928454  258 EAIFIALYSILLISVLIDSVIKPILIVFIKKrifkttlkINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYEN 337 Helicobacter pylori
8928492  277 GGIFVLLWHLLVV-TNIDNVLRPILVPRDAR--------LNSALMLLSVFAGITMFGPWGIIIGPVLMILIVTTIDVYLA 347 Mycobacterium tuber...
8928492  277 GGIFVLLWHLLVV-TNIDNVLRPILVPRDAR--------LNSALMLLSVFAGITMFGPWGIIIGPVLMILIVTTIDVYLA 347 Mycobacterium tuber...
8928462  304 MRGTLFLFVAGSSITIIDSFLRPLLLQNKMR--------IHPLLIFFSMLGGVQTFGFNGMVLGPILVILLFTVIDLTHD 375 Treponema pallidum
8928476  258 EAIFIVLYSILLIGVLIDSVIKPILIVFIKKrifkttlkINEILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYEN 337 Helicobacter pylori...
16262524 485 FEFLE-ILLGNEPv--L 498 Sinorhizobium meliloti
15613026 360 NGIWR-FIKGESTr--- 372 Bacillus halodurans
15615171 347 KLNFKl----------- 352 Bacillus halodurans
8928522  360 KEIWS-YITVQQK---- 371 Bacillus subtilis
15792686 341 LKDKNli---------- 347 Campylobacter jejuni
8928454  338 YFIQN-EQKACE----- 348 Helicobacter pylori
8928492  348 VYKGV-ELEQFEAppvR 363 Mycobacterium tuberculosis
8928492  348 VYKGV-ELEQFEAppvR 363 Mycobacterium tuberculosis
8928462  376 GESHYtSIFHDPPaagV 392 Treponema pallidum
8928476  338 YFIQK-EQKTCEC---- 349 Helicobacter pylori J99
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