Conserved Protein Domain Family
PRK08295

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PRK08295: PRK08295 
RNA polymerase sporulation sigma factor SigH
Statistics
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PSSM-Id: 181361
Aligned: 122 rows
Threshold Bit Score: 225.173
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
160881445   1 MSKKQYEMISDEE---IISLIRGDDRLAMDYLIDKYKNLVRKKAKALYLIGGDREDLIQEGMIGLYKAIRDYQKDKEASF 77 
170288204   6 LRSKRVEE--------LVEYAQAGFKEAIDLIVEKYYPMVVKIASQYFASWAEHEDIVQNGLVGLIKAIFYYDKTK-SSF 76 
15643300    1 --MLKYR-LRSKRveeLVEYAQAGFKEAIDLIVEKYYPMVVKIASQYFASWAEHEDIVQNGLVGLIKAIFYYDKTK-SSF 76 
222099110   1 --MLKYR-LRGKRveeLVEYAQAGFKEAIDLIIEKYYPMVVKISSRYFASWAEQEDVIQNGLVGLIKAIFYYDSSK-SSF 76 
217076384   1 --MIKYN-LRGKRiekLVELAQSGLKEALELIIEKYYPMVIRISSKYYAPWAEFEDIVQNGLIGLIKAVFYFDNEK-SSF 76 
154248931   6 LRNKPIEK--------LVELAQSGLNDAVDLIIEKYYPMVVRIASQFYAPWAEFDDIVQNGLIGLIKAIYYFEEN-KSSF 76 
148269529   6 LRSKRVEE--------LVEYAQAGFKEAIDLIVEKYYPMVVKIASQYFASWAEHEDIVQNGLVGLIKAIFYYDKTK-SSF 76 
150019951   1 --MIKYN-LRVKRtekLVELAQSGLMEALELIIERYYPMVVKISSKYYAPWAEFEDIVQNGLIGLIKAVFYFNFEK-SSF 76 
157364507   2 NVKYSLRTKRTEE---LVNLAQSGLKEALDLLVEKFYPMVVKISSKYYAPWAEFQDLVQNGLVGLIKAVYYYQSDK-GGF 77 
281411753   6 LRSKRVEE--------LVEYAQAGFKEAIDLIVEKYYPMVVKIASQYFASWAEHEDIVQNGLVGLIKAIFYYDKTK-SSF 76 
160881445  78 LTFADLCVSRQMYTAIKNSNTKKNQPLNNYISIDSSNynndVEGADSISYVA-HLAHARSMNPEEMLIDRENTSQLETKL 156
170288204  77 TSFAWRSVDSEIKSFLTYLNRKKNRMLSDAVNVDG------MEKEEDDAPFE-V------PDSETDVARSAFSGIILETV 143
15643300   77 TSFAWRSVDSEIKSFLTYLNRKKNRMLSDAVNVDG------MEKEEDDAPFE-------VPDSETDVARSAFSGIILETV 143
222099110  77 TSFAWRSVESEIKSFLTYMNRKKNRMLSDAVKVES------MEKEEDDSPFE-------MPDASRDIAQSALSDIILEKV 143
217076384  77 NSFAWKSIEGEVQTFITYLNRKKNKILSDSSSIDV------FDEEESGEQADySLQDKSTNIPKKIFIDI-----IKETI 145
154248931  77 STFAWRSIESEIKTFITYQNRKKNKMLSDSTSMDSVF----DDVDDEQIDYF-VADENTSTN----VVKKTILSIVHEEI 147
148269529  77 TSFAWRSVDSEIKSFLTYLNRKKNRMLSDAVNVDG------MEKEEDDAPFE-V------PDSETDVARSAFSGIILETV 143
150019951  77 NSFAWRSIESEIQTFITYLNRRKNKILSESSSIDV------FDEEEGTEQAD-----YSLADKESNIIKTAFIQIIKEKI 145
157364507  78 TSFAWTSVESELKSFLTFLNRRKNRMLTDALSVDSIT-----DEESDETGYS-------FEDAGTSTVRQAVLEIVMEKV 145
281411753  77 TSFAWRSVDSEIKSFLTYLNRKKNRMLSDAVNVDG------MEKEEDDAPFE-V------PDSETDVARSAFSGIILETV 143
160881445 157 MDSLSSFEKKILTLYLNDNSYSKIAQMLKKEPKAIDNGLQRIKR----KLNTALKDLQGK 212
170288204 144 LELLNEKEKEIFLRWLDGCSYSEIAKELGVNTKKVDNTVQKVKR----MISGLG------ 193
15643300  144 LELLNEKEKEIFLRWLDGCSYSEIAKELGVNTKKVDNTVQKVKR----MISGLG------ 193
222099110 144 LENLNELEKNIFLRWLDGYSYKEIAEEFRVSSKKVDNTVQKVKR----MISELG------ 193
217076384 146 VKHLKDVEIDIFEMWLDGYSYAEIQEELNVNFKKVDNTIQKAKRigrtKIDRFIIEQVFN 205
154248931 148 LEKLNEEETQIFELWLDGYSYKEIEEMVGVNFKKVDNTVQKVKK----IVRSKLSASILp 203
148269529 144 LELLNEKEKEIFLRWLDGCSYSEIAKELGVNTKKVDNTVQKVKR----MISGLG------ 193
150019951 146 TLYLKDIELDIFEMWLDGYSYKEIEKELNINFKKIDNTIQKVKRigrtKIDKFILDQVFT 205
157364507 146 NGHLTDLEQGIISMWINGSSYEQIEQELNVNFKKVDNTVQKFKRivktKIDPLLITIFFQ 205
281411753 144 LELLNEKEKEIFLRWLDGCSYSEIAKELGVNTKKVDNTVQKVKR----MISGLG------ 193
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