Conserved Protein Domain Family
RpiR

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COG1737: RpiR 
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription]
Statistics
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PSSM-Id: 441343
Aligned: 936 rows
Threshold Bit Score: 63.4081
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012248897   1 McfftpcppatvplpslpL--PVQQRLQS-LLEQLPPELQRAAHWVADHPAEVG--LWSMRRQAQALGVAPATMLRLARA 75 
WP_106790039   1 ----------------------MVLAIQE-TEGKYTRSDKKILEFIEESTEEFL--FMSIGQLAERLEMSEATISRFARH 55 
WP_125988746   1 Mk---------------------IYNLDI-DINQLSKSEKKIANFITKNMSKVP--YLNLQELSKAIGVSIATISRFCVS 56 
WP_025734544   1 ------------------Mr-SFLGKLATiDKNKLTTRETKIVDYIKKNLQMIVatNMKIVTLSQEVETGYSAIYGLLKK 61 
WP_011183381   1 ------------------Mr-SFLAKLSTiEENNLTTRELIIVDYIKSNSKQIVeeNIKIDELARRAKTGFSAIYNLLKK 61 
WP_013253317   1 Mg----------------T--DwLERLQA-GESELSRTERDLVSYINNHPEFAV--SLTQLKLAEAAGVSKPVVISCFRK 59 
WP_069974293   1 ----------------------MIELLEI-DKNKLTKKDYMILDYLLRNENQLF--YESSKDIAEKIGVSNTTISRFWKK 55 
WP_013708440   1 ------------------M--DAFTQMEL-HKEDLSPREQEIYRLFRDNPEEIA--ASSSTAIAKRFHVSQSAVSRFCKK 57 
WP_016339215   1 Mv----------------SnnDV--FL---DLSMLAGRELDFYYFTINNYDFLI--NSNLQTLSQKYGVGMSFIYGFFKK 57 
WP_016338641   1 Me---------------aI--SILSKLSM-IQGSLTKKETKIVNYLKANINNLR--TIKIEDLSTATGIGYSPIYSLIKK 60 
WP_012248897  76 AGYDSYEAFRAPFQQALAGERpASlrERA-AE-LqaaH-----G-SA-GAPghDALTEL--QA-RAIQSVCSLNS-SAAF 142
WP_106790039  56 IGYGDFKELKSAVARQKNGR--GAa-RKM-AGtLmk--------geGfD-I--ESWFSY--QQ-ECMMRTLADLD-QREF 116
WP_125988746  57 IGFSGFKDFKNHIKNNY--EI-SPa-NKM-KS-Il--Ne---iR-DE-DIG--AQIINK--TI-NYLKKTIEYLS-NDNF 117
WP_025734544  62 LNIQGYRDFSISLANDAEA-I---------EIdI---Skn------------dEHVTNG--YI-SMIQHNYSLLE-KKVM 112
WP_011183381  62 MNIDGYRDFMICLANDVEHA----------ELnIak---------------ndENVANG--YI-NLIKQNYTLIK-KANL 112
WP_013253317  60 LGFVDYRSFQNSIEQfFSTQI-DAl--RA-SErMqdr----vhS-VE-ELI--HEAAAV--DI-RSLQRLERSIS-AQTL 123
WP_069974293  56 IGYQNIKEFQKWMAEKTEA---TPa-lKI-KN-Tl--Qkl--eG-KD-SdL--NELFLK--SI-KNIEKTIALFS-YEQV 117
WP_013708440  58 VGFRGYGDFRINMVLSFEMR--NKp-----------------rSrQS-RAr--EDIADD--IA-AYIREIRIVAT-DQAL 111
WP_016339215  58 LNVSGLKEYIFKLGi-LH-GV------SL----It--KkndknScNS-QVL---TLIQDnyQVsNNINVVMFQ-DqQAKF 118
WP_016338641  61 LGFQGYRNFVIAVVAEQE---------RLnNSnLna------dA--T------ENISQF--YH-DIIQRNNQVFD-KPAL 113
WP_012248897 143 DASVKTLLEARQVGFLG-TRSAFGIAFQMHYAYQLVRRNSVLIDG-LGGLQAETVDNLRDGDALIAISQSPYPS-ASVRL 219
WP_106790039 117 IKALDQIGGARRIFIHA-KNASAAAGQLLFFRLRRMGFPVQMIPS-GGSEVLEGLAQAGEGDLVILFSYSKVSE-EGKMI 193
WP_125988746 118 NRAIKSINTAEDIYIFS-PGPSESVANLLFFRLNRFGLNVNKMAK-SGKELFENLINLSKDDLIIIFGFFNVSP-EIKII 194
WP_025734544 113 FETLKLIKNTSRLYIVYwESVLRGATTELANFFYSQKLPVILLDS-DWDTINQRVLDADKGDLFIFYTKYGTSL-HLEKV 190
WP_011183381 113 VKTINLIDSSPRIVICYwEGVLRGPAMDLSNFFYNHGVNVTLLDS-DWDSINNRIKNTQTNDLYIFLTKYGTST-HLSKV 190
WP_013253317 124 NDLASRCFSARTLYLFG-EGTGYYPAHYLAQRLRRYGRQALMVTQ-DPSHRPDLLHPMGSDDVLFLFHYSDNDA-WLWPL 200
WP_069974293 118 DKAADLVLKHKRIYVFA-PDASFGVAHIIQYRLRRFGIEFIFING--GSSIYEYLINIKEDDLVIIFCFSRILA-ETTIL 193
WP_013708440 112 GQLCSRISRARLVYTIG-QAASSLGARYLAFLLVELSVRAQFVSS-Gw--EEQMLSCMTDEDLIIIFSARNPSQqRFLKA 187
WP_016339215 119 DQLITILSQAKIIYAFG-AGHSLIALTDLCGMLTHFGLVTQILER--GKNITKTVLSMTKNDVLIIFSMRGLND-FHLQL 194
WP_016338641 114 QKIVGWFKKAKIISIAG-LGIAELAAQELATRLFYFGFFANVLTGtDEN-IILKAAALNENDVLICFCLDHHNS-ILINA 190
WP_012248897 220 ARQA-AQQ--GVAVIALTDDTLS-PLAVDARHV--LLFER---P--D-RegvrhqpaqrgpgS-FFHTT----AGLLGLA 282
WP_106790039 194 LDYA-GEA--GYNTLAFTSRKYA-PKEQRSDVN--LYVYR---G--E-K-------------K-EYHSM----TAAVAVV 243
WP_125988746 195 LDYK-KKI--GFKTILITDLIVS-EMNKTSDII--LYVER---G--E-I-------------W-EFHTM----VTPMALI 244
WP_025734544 191 ITRI-KDK--NAKVVFVSGRIPSpQIQKNSDSVhtLVIDNvdeN--K-E---------------VVLSKs---VPFHYFN 246
WP_011183381 191 IEAI-RKQ--KGKSIFISGKVPSkEVEENASLVhtLIVDGveiN--D-D-------------N-VLISKs---LPFHYFN 247
WP_013253317 201 LDLA-RKR--SVWTLLVSATIHP-DYVAGASCF--LHVPR---G--E-Fq-----------fK---NSI----AVPMHFA 250
WP_069974293 194 LEQK-KAA--HYAVIIFTDLLSQ-DLQEKSDVI--LYSYR---G--E-P-------------T-EYHSM----TAPMAIV 243
WP_013708440 188 LRARgEKL--QPSVMLITQTARH-PLRSLADDI--FVLPT---R--Q-Ag---------------rACRvggcSASMLYF 241
WP_016339215 195 LKLF-RREqiPGQVVLITSNLNS-ELNKYTNLS--IFIDN---QirRiNdl---------edNlIFSPL----WSFLFFT 254
WP_016338641 191 TKEA-KAR--GAYVITVTAKLNT-DISRYADLNygIITSAlydK--S-E-------------V-MISSL----LPLIYWN 245
WP_012248897 283 EHLIARLTA--R---G-GE-EVLNRLSEIEDRM---HAD------KV 313
WP_106790039 244 DALVLALSE--R---S-KE-TIAASLIRVQKLK---EHYgtkr---- 276
WP_125988746 245 EALIVGITI--N---N-EE-KYLKKLNNLHELR---KHY------AN 275
WP_025734544 247 DLLIYHYN---Hi--T----K---------------K---------- 259
WP_011183381 248 DLLIYHYL-------N-SE-K---------------K---------- 260
WP_013253317 251 NLVLLACELiyR---N----EVKEQLTALESTRgawNRAs----gKN 286
WP_069974293 244 DCVIIKIAM--K---A-EN--AVGHMDKLNQIR---GKY------QG 273
WP_013708440 242 DQLLADAMT--RamkTaGAlDLKTEMDRAEDSAa--Nta-------- 276
WP_016339215 255 DYLKNLFYi--K---N-KK--LIDEK---DSFL---QEMnswhdnKR 287
WP_016338641 246 DTLLQHIMTl-----D-SD-K--EYLDNKAKMI----RLv-----KK 274
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