Conserved Protein Domain Family
ddrB-ParB

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pfam18763: ddrB-ParB 
ddrB-like ParB superfamily domain
A member of the ParB/sulfiredoxin superfamily of proteins found in polyvalent proteins prototyped by the version in the phage P1 ddRB protein. These proteins are predicted to function as nucleases.
Statistics
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PSSM-Id: 436719
Aligned: 33 rows
Threshold Bit Score: 101.206
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Aave_2383  761 NEWAAVKTKRAGTNPEGTGAVGAatPEIQNRDRARPASVVQMQGMAQSPDYMRLGPSRSP-ETGAPMVfavgdqvhaaha 839 
WP_067595301   646 LDNQMRQARLQLMEADELTPSVAg-TDNQYRDRSRAASQMQINHIAQNLEPELLGDSKEV-GTGAPTL------------ 711  Eikenella lo...
WP_095230178   709 VNGKDYKATFKLIEKDDLKPNFT---NSKTQYR-LEDNKVAKANLANFNANTHLNISNQTlEDGVPLL------------ 772  Helicobacter...
WP_015453780     4 DETAPFEAEFAVVKLSDIKPNFD---NSNTQGR-LIKQESAIANIVNDFKPELIFYQEGG-VNGVPII------------ 66   Helicobacter...
ANT42865      1160 NDDEIHPLKFVIVNKSDLKPNFK---NTGTQTR-TAVDSKKVEEIAERFDPKLIIGRGG--FDDLPII------------ 1221
CCB80576       291 DDARIYPLDFVIVKTSDVKPNLN--AGVGTQTR-TQTNPQRIEEIAKDFKPTMVFNRGG--FDDLPII------------ 353 
EFX41727       243 DDTHIYLLDFVVVKTTDVKPNMQ--AKSGVQTR-TQTDLNKVAEIANNFKPEYVINRGG--FDDLPII------------ 305 
WP_066456848   579 NENEIYPLDFVIVKKQDLKPNFN---ASELQGR-TEANTHTIQDIANNFNPQKILGRGG--FQDLPII------------ 640  Helicobacter...
ETD27326      1281 SDDEIIPLDLVVVKASDIEPNFY---ASEFQPR-TSKNTQVIEAIAKNFNPELVLGRGG--YKDLPII------------ 1342
EXI76490       503 PNTGTQP-------APEPTGQDV---NLQNRDRSRAASVIQMSEIARNPDYMRLGPSRTP-DSGAPMVfavgddlsripa 571 
jgi:Aave_2383  840 igrgdtavmsdgqrvp--fqyavmeagdvqpsnfadggvnplfdaAHPGtVKALNNGRTAGLRAA---YER-G--TADSY 911 
WP_067595301   712 ---------------------------------------------ANDGrTIIGGNGRVMGLAQA---YDN-G--NGEGY 740  Eikenella lo...
WP_095230178   773 ---------------------------------------------DKLG-NIISGNHRSQKLLGL---TPL----EKKSY 799  Helicobacter...
WP_015453780    67 ---------------------------------------------TRDG-KVVSRNHRSEALRQIfnaQTHnAetAQQKY 100  Helicobacter...
ANT42865      1222 ---------------------------------------------LKDG-QVIAGNHRTQGMLNF---NAG----SRKKY 1248
CCB80576       354 ---------------------------------------------LADG-QVIAGNHRAKGMQSF---SPQ----SREAY 380 
EFX41727       306 ---------------------------------------------INDG-QVIVGNHRALGMQEF---SPE----SRKAY 332 
WP_066456848   641 ---------------------------------------------RKDG-AIISGNHRTQGMLEF---SQE----SRAAY 667  Helicobacter...
ETD27326      1343 ---------------------------------------------NKEG-KVIIGNHRVQGFKDF---SQE----SRQAY 1369
EXI76490       572 tsfgngdvavmsdgqrvpfryavvdasqvepsnfadgrvnpafaaGQTGtIKALNNGRTAGLRAA---YEL-G--SAGTY 645 
jgi:Aave_2383  912 RQELMADSAMHGIDpqVIAGMRAPMLVRLYS 942 
WP_067595301   741 RQYLLDHADEFGLSreEIARMNKPVLVRQLD 771  Eikenella longinqua
WP_095230178   800 EEALAKFL---GDKkdLLKNYSNPILIRVLD 827  Helicobacter sp. 13S00401-1
WP_015453780   101 KQGAKEFLG--------VALENDEIIVRRLK 123  Helicobacter cinaedi
ANT42865      1249 EQAIKENFN--------IELKPDELLVRMPK 1271
CCB80576       381 ERAVLEHYN--------ITLKSDELLLRTPK 403 
EFX41727       333 EQAISNTYG--------IELKHDELLVRTPK 355 
WP_066456848   668 ENAIKEQYG--------ITLKDDELLMRTPK 690  Helicobacter sp. CLO-3
ETD27326      1370 ESAIKDRYG--------IELAPDELLLRIPS 1392
EXI76490       646 QTELAKDLANVGISpgALQATPNPILVRVYS 676 
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