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MIGS Cultured Bacterial/Archaeal sample from Helicobacter pylori Hp H-6

Identifiers
BioSample: SAMN01818774; Sample name: Hp H-6
Organism
Helicobacter pylori Hp H-6
cellular organisms; Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
broad-scale environmental contextterrestrial biome [ENVO:00000446]
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitude41.4994 N 81.6956 W
collection date2011-04-28
collection method gastric biopsy
investigation typebacteria_archaea
host taxonomy ID9606 (9606)
local-scale environmental contexthuman-associated habitat [ENVO:00009003]
geographic locationUSA:Ohio, Cleveland
reference for biomaterialnot determined
environmental mediummucus [ENVO:02000040]
environmental packagemissing
project nameComparative Sequence Analysis Of H. Pylori Isolates From Subjects With Distinct Gastric Pathologies
diseasegastritis
number of repliconsnot determined
strainHp H-6
finishing strategy (depth of coverage)26.35
nucleic acid extractionQiagen DNA kit
assemblyCelera Assembler 6.1
sequencing method454 and Illumina
Description

Keywords: GSC:MIxS;MIGS:6.0

Links
GSCID Comparative Sequence Analysis Of H. Pylori Isolates From Subjects With Distinct Gastric Pathologies
BioProject
PRJNA64149 Helicobacter pylori Hp H-6
Retrieve all samples from this project

Submission
University of Maryland School of Medicine, Institute for Genome Sciences, Lynn Schriml; 2012-11-26
Accession:
SAMN01818774
ID:
1818774

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