Metagenome-Assembled Genome: SRR17798006_bin.11_Me... - BioSample

Metagenome-Assembled Genome: SRR17798006_bin.11_MetaWRAP_v1.3_MAG

Identifiers: BioSample: SAMEA114065767; SRA: ERS16049183

Organism: Eubacterium ventriosum
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Eubacterium

Attributes

broad-scale environmental context	Human digestive system
collection date	2020-04/2020-11
environmental medium	faeces
geographic location	China
investigation type	metagenome-assembled genome
isolation source	human feces metagenome
project name	aimed to study the gut microbial community of patients with invasive and non-invasive pituitary adenoma.
sample name	SRR17798006_bin.11_MetaWRAP_v1.3_MAG
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2023-07-13T20:34:54Z
ENA-LAST-UPDATE	2023-07-13T20:34:54Z
External Id	SAMEA114065767
INSDC center alias	EMG
INSDC center name	EMG
INSDC first public	2023-07-13T20:34:54Z
INSDC last update	2023-07-13T20:34:54Z
INSDC status	public
Submitter Id	SRR17798006_bin.11_MetaWRAP_v1.3_MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaspades v3.15.3
binning parameters	MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
binning software	MetaWRAP v1.3
broker name	EMG broker account, EMBL-EBI
completeness score	96.64
completeness software	CheckM
contamination score	0.0
geographic location (latitude)	22.32
geographic location (longitude)	114.03
local environmental context	colon
metagenomic source	human feces metagenome
sample derived from	SAMN25210047
scientific_name	Eubacterium ventriosum
sequencing method	HiSeq X Ten
taxonomic classification	The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Eubacteriales;f__Eubacteriaceae;g__Eubacterium;s__Eubacterium ventriosum
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR17798006 of study SRP357125.

BioProject: PRJEB63161
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Submission: EBI; 2023-07-17

Accession:: SAMEA114065767
ID:: 36481383

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Metagenome-Assembled Genome: SRR17798006_bin.11_MetaWRAP_v1.3_MAG

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