MIGS Cultured Bacterial/Archaeal sample from Bacte... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00627059; Sample name: Sample BPAC-454_060823_TUBE1; SRA: SRS211910

Organism: Pseudoflavonifractor capillosus ATCC 29799
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Pseudoflavonifractor; Pseudoflavonifractor capillosus

Attributes

collection date	not determined
estimated size	4242000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Pseudoflavonifractor capillosus ATCC 29799
geographic location	not determined
source material identifiers	ATCC 29799
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	ATCC 29799
environmental package	missing
isolation source	missing
finishing strategy (depth of coverage)	Level 3: Improved-High-Quality Draft8.2x;155
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	Newbler, PCAP
misc_param: HMP supersite	gastrointestinal_tract
sequencing method	Sanger, 454-GS20
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf