Seed, germinating seeds and seedlings metagenomes ... - BioSample

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Result Filters

Organism: Phaseoleae environmental sample
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; environmental samples

Attributes

collection date	2015-01-09
broad-scale environmental context	seed
local-scale environmental context	comercial inoculum
environmental medium	comercial inoculum
geographic location	France
investigation type	metagenome
project name	MetaSeed
sample name	MetaSeed1
ENA first public	2018-05-22
ENA last update	2017-09-29
ENA-CHECKLIST	ERC000020
External Id	SAMEA104326132
INSDC center alias	INRA Angers
INSDC center name	INRA Angers
INSDC first public	2018-05-22T17:03:04Z
INSDC last update	2017-09-29T15:03:33Z
INSDC status	public
Submitter Id	MetaSeed1
geographic location (latitude)	47.4667
geographic location (longitude)	-0.55
plant-associated environmental package	plant-associated
sequencing method	Shotgun Illumina sequencing

Description: In this project, we aim to apply metagenomics approaches to uncover the function of the seed microbiota and its changes during germination and emergence. We will try to reveal through metagenomics the genetic content of this microbiota in seeds, germinating seeds and seedlings from 2 different plant families (Fabaceae and Brassicaceae).