U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Brevundimonas sp. UBA5539 genome recovered from SRX472115

Identifiers
BioSample: SAMN06455137; Sample name: Brevundimonas sp. UBA5539; SRA: SRS2033914
Organism
Brevundimonas sp. UBA5539
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas; unclassified Brevundimonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationHong Kong
isolateUBA5539
isolation sourcewater
metagenome sourcewastewater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX472115 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.62%
contamination_estimated2.88%
environmental_sampletrue
genome_coverage8.73
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR1171178.
Description

Uncultivated genome recovered from an assembly of the SRX472115 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455137
ID:
6455137

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center