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Items: 1 to 20 of 4395

1.

Saccharomyces cerevisiae BY4741

Toxicity of the model protein 3×GFP arises from degradation overload, not from aggregate formation

Taxonomy:
Saccharomyces cerevisiae BY4741
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Okayama University
Accession:
PRJDB17991
ID:
1105237

2.

Transcriptome-wide mRNA condensation precedes stress granule formation and excludes stress-induced transcripts

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Other
Scope:
Multiisolate
University of Chicago
Accession:
PRJNA1105055
ID:
1105055

3.

Site saturation mutagenesis of 500 human protein domains

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Other
Scope:
Multiisolate
CRG Barcelona
Accession:
PRJNA1105013
ID:
1105013

4.

A complete map of affinity and specificity encoding for a partially fuzzy protein interaction

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Other
Scope:
Multiisolate
Ben Lehner, Centre for Genomic Regulation
Accession:
PRJNA1104259
ID:
1104259

5.

Genome-wide nucleosome and transcription factor responses to genetic perturbations reveal mechanisms of chromatin-mediated transcriptional regulation

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Epigenomics
Scope:
Multiisolate
Department of Pharmacology and Cancer Biology, Duke University
Accession:
PRJNA1096944
ID:
1096944

6.

Refined mechanism of promoter Nucleosome-Depleted Regions resetting after replication

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Other
Scope:
Multiisolate
Francoise Stutz, Department of Molecular and Cellular Biology, University of Geneva
Accession:
PRJNA1090510
ID:
1090510

7.

Sef1-dependent gene expression in Saccharomyces cerevisiae

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
N411 JYL lab, Institute of Molecular Biology, Academia Sinica
Accession:
PRJNA1090084
ID:
1090084

8.

Swd2/Cps35 determines H3K4 tri-methylation via interactions with Set1 and Rad6_H3K4me3 ChIPseq in WT and several strains

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Epigenomics
Scope:
Multiisolate
Kangwon National University
Accession:
PRJNA1085653
ID:
1085653

9.

An end-to-end workflow to study newly synthesized mRNA following rapid protein depletion in Saccharomyces cerevisiae

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Donczew lab, Cell Cycle and Cancer Biology Research Program, Oklahoma Medical Research Foundation
Accession:
PRJNA1085387
ID:
1085387

10.

RPA and Rad27 limit templated and inverted insertions at DNA breaks

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Other
Scope:
Multiisolate
Boston children's hospital
Accession:
PRJNA1083233
ID:
1083233

11.

Saccharomyces cerevisiae strain:W303-1B

Saccharomyces cerevisiae strain:W303-1B Raw sequence reads

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Raw sequence reads
Scope:
Multiisolate
Yale University
Accession:
PRJNA1080618
ID:
1080618

12.

wt and sua7-1 nascent mRNA profiling in relation to termination of transcription

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Schrader Lab, Biological Sciences, Wayne State University
Accession:
PRJNA1080519
ID:
1080519

13.

The kinase Rio1 and a ribosome collision-dependent decay pathway survey the integrity of 18S rRNA cleavage

Taxonomy:
Saccharomyces cerevisiae BY4741
Project data type: Other
Scope:
Multiisolate
Katrin Karbstein, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation and Technology
Accession:
PRJNA1080508
ID:
1080508

14.

Saccharomyces cerevisiae strain:K1401

Transcriptome of sake yeast in coculture with the kuratsuki Kocuria

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multispecies
Department of Food and Life Sciences, Toyo University
Accession:
PRJDB17615
ID:
1079925

15.

Saccharomyces cerevisiae strain:K1401

Transcriptome of sake yeast in monoculture

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Department of Food and Life Sciences, Toyo University
Accession:
PRJDB17614
ID:
1079924

16.

Effects of formalin-fixation on FAIRE-Seq and MNase-Seq signatures in yeast (RNA-Seq)

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
National Research Collections Australia, CSIRO
Accession:
PRJNA1078351
ID:
1078351

17.

Effects of formalin-fixation on FAIRE-Seq and MNase-Seq signatures in yeast

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Epigenomics
Scope:
Multiisolate
National Research Collections Australia, CSIRO
Accession:
PRJNA1078344
ID:
1078344

18.

Auto-sumoylation of the Ubc9 E2 SUMO-conjugating Enzyme Extends Cellular Lifespan (RNA-Seq)

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Lab of Molecular Epigenetics, Biotechnology, Kyungpook National University
Accession:
PRJNA1072738
ID:
1072738

19.

Growth regulated co-occupancy of Mediator and Lsm3 at intronic ribosomal protein genes [RNA-seq]

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
IceLab, Physics, Umea University
Accession:
PRJNA1071641
ID:
1071641

20.

Growth regulated co-occupancy of Mediator and Lsm3 at intronic ribosomal protein genes [ChIP-seq]

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Epigenomics
Scope:
Multiisolate
IceLab, Physics, Umea University
Accession:
PRJNA1071639
ID:
1071639

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