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Accession: PRJNA275000 ID: 275000

Caenorhabditis elegans strain:CB4856

Caenorhabditis elegans Hawaiian Strain CB4856 Genome Assembly

See Genome Information for Caenorhabditis elegans
Among the many wild isolates of C. elegans, one of the most genetically divergent and most heavily studied is CB4856, which was isolated in 1972 by Linda Holden from a pineapple field on the Hawaiian island of Maui (under the name HA8) (HODGKIN AND DONIACH 1997). More...
AccessionPRJNA275000
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismCaenorhabditis elegans[Taxonomy ID: 6239]
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans
PublicationsThompson OA et al., "Remarkably Divergent Regions Punctuate the Genome Assembly of the Caenorhabditis elegans Hawaiian Strain CB4856.", Genetics, 2015 Jul;200(3):975-89
SubmissionRegistration date: 21-Apr-2015
University of Washington
RelevanceEvolution
Locus Tag PrefixTZ46
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)8
WGS master1
SRA Experiments1
Publications
PubMed1
PMC1
Other datasets
BioSample2
Assembly1
SRA Data Details
ParameterValue
Data volume, Mbases226
Data volume, Mbytes134

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