Our understanding of the evolution of genomes of midges, mosquitoes, and flies—Diptera—is better than for any other insect order as so far some 95 whole genomes have been sequenced and are publicly available. However, the available Diptera genomes are not evenly distributed across this 250 Million year old radiation and skewed towards medically important malaria-transmitting mosquitoes (24 genomes) and species of Drosophila used as model organisms in genetic research (25 genomes). Here, we provide the first high-quality genome and several transcriptomes for orthorrhaphous flies and specifically Asiloidea in the center of center of the Diptera Tree of Life.
| Accession | PRJNA345052 |
| Type | Umbrella project |
| Grants | - "Asiloid flies in the Nama Karoo and comparative phylogenomics" (Grant ID 33GGI2014GRANTA-DikowT, Smithsonian Institute of Biodiversity Genomics - Global Genome Initiative)
|
| Submission | Registration date: 30-Sep-2016
Smithsonian Institution, National Museum of Natural History |
| Relevance | Evolution |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (WGS master) | 1 |
| SRA Experiments | 17 |
| Other datasets |
| BioSample | 17 |
| Assembly | 1 |
This project encompasses the following 16 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Scaffolds |
1
|
|
| transcriptome | 15 |
BioProject
accession | Organism | Title |
|---|
| PRJNA343825 | Apiocera parkeri | Apiocera parkeri de novo transcriptome (Smithsonian Institution,...) | | PRJNA343891 | Diogmites neoternatus | Diogmites neoternatus de novo transcriptome (Smithsonian Institution,...) | | PRJNA343820 | Ectyphus pinguis | Ectyphus pinguis de novo transcriptome (Smithsonian Institution,...) | | PRJNA343896 | Fidena pseudoaurimaculata | Fidena pseudoaurimaculata de novo transcriptome (Smithsonian Institution,...) | | PRJNA343827 | Laphystia limatula | Laphystia limatula de novo transcriptome (Smithsonian Institution,...) | | PRJNA343889 | Lasiopogon cinctus | Lasiopogon cinctus de novo transcriptome (Smithsonian Institution,...) | | PRJNA343807 | Machimus occidentalis | Machimus occidentalis de novo transcriptome (Smithsonian Institution,...) | | PRJNA343822 | Messiasia californica | Messiasia californica de novo transcriptome (Smithsonian Institution,...) | | PRJNA343821 | Mydas clavatus | Mydas clavatus de novo transcriptome (Smithsonian Institution,...) | | PRJNA343892 | Nicocles dives | Nicocles dives de novo transcriptome (Smithsonian Institution,...) | | PRJNA343818 | Philonicus albiceps | Philonicus albiceps de novo transcriptome (Smithsonian Institution,...) | | PRJNA343798 | Scleropogon duncani | Scleropogon duncani de novo transcriptome (Smithsonian Institution,...) | | PRJNA343894 | Tabanus discus | Tabanus discus de novo transcriptome (Smithsonian Institution,...) | | PRJNA343898 | Thevenetimyia californica | Thevenetimyia sp. de novo transcriptome (Smithsonian Institution,...) | | PRJNA343802 | Tolmerus atricapillus | Tolmerus atricapillus de novo transcriptome (Smithsonian Institution,...) |
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