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Accession: PRJNA295927 ID: 295927

soil metagenome

Comparison of rhizosphere microbial community between tomato cultivar Hawaii 7996 and Moneymaker

To reveal the possible role of the microbial community in the resistance of tomato plants to the bacterial wilt caused by Ralstonia solanacearum, the comparative microbiome analysis between the rhizospheres of Hawaii 7996, a tomato cultivar resistant to the bacterial wilt, and Moneymaker, a susceptible cultivar was conducted. More...
AccessionPRJNA295927
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsoil metagenome[Taxonomy ID: 410658]
unclassified sequences; metagenomes; ecological metagenomes; soil metagenome
SubmissionRegistration date: 13-Dec-2017
- Yonsei University
- Dong-A University
RelevanceAgricultural
Locus Tag PrefixTRG1
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)60
WGS master3
SRA Experiments18
Protein Sequences3589
Other datasets
BioSample20
Assembly3
SRA Data Details
ParameterValue
Data volume, Mbases273
Data volume, Mbytes176

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  • PRJNA295927 (1)
    BioProject
  • soil metagenome
    soil metagenome
    Comparison of rhizosphere microbial community between tomato cultivar Hawaii 7996 and Moneymaker
    BioProject

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