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Organizing biological data

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Select item 9801741.

iValiD-TB: A fully characterized Mycobacterium tuberculosis dataset for antimicrobial resistance bioinformatics workflow validations

: Project data type: Raw sequence reads

Scope:: Multispecies

Wadsworth Center

Accession:: PRJNA980174
ID:: 980174

Select item 8827482.

Illumina sequencing of M. tuberculosis

: Project data type: Raw sequence reads

Scope:: Multispecies

RIVM

Accession:: PRJNA882748
ID:: 882748

Select item 7242933.

MCANRCSEQ

Genome sequencing of Mycobacterium canettii recombinants

: Project data type: Other

Scope:: Monoisolate

Genopole Institut Pasteur

Accession:: PRJEB42505
ID:: 724293

Select item 7039174.

Mycobacterium africanum and Mycobacterium orygis in Norway

Whole-genome sequencing of all M. africanum and M. orygis isolates identified in Norway 2010-2020.

: Project data type: Other

Scope:: Monoisolate

NORWEGIAN INSTITUTE OF PUBLIC HEALTH

Accession:: PRJEB43202
ID:: 703917

Select item 6557475.

Systemic and comparative biology of the Mycobacterium tuberculosis complex: effects of genetic variability on bacterial phenotype

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

University of Sao Paulo

Accession:: PRJNA655747
ID:: 655747

Select item 6503816.

Assessing Nanopore sequencing for clinical diagnostics: a comparison of NGS methods for Mycobacterium tuberculosis

: Project data type: Raw sequence reads

Scope:: Multispecies

Wadsworth Center

Accession:: PRJNA650381
ID:: 650381

Select item 6160817.

Molecular Epidemiology of Mycobacterium tuberculosis complex (MTBC) in Ghana

: Project data type: Raw sequence reads

Scope:: Multispecies

Noguchi Memorial Institute for Medical Research - University of Ghana

Accession:: PRJNA616081
ID:: 616081

Select item 6001968.

Mtb L6 genomics

Comparative genomics shows differences in the electron transport and carbon metabolic pathways of Mycobacterium africanum relative to Mycobacterium tuberculosis and suggests an adaptation to low oxygen tension

: Project data type: Other

Scope:: Monoisolate

Institute of tropical medicine

Accession:: PRJEB36076
ID:: 600196

Select item 5929449.

Public data extends TB surveillance

Publicly available whole-genome sequencing data supports TB surveillance

: Project data type: Other

Scope:: Monoisolate

ROBERT-KOCH INSTITUTE

Accession:: PRJEB35201
ID:: 592944

Select item 53467410.

Mycobacterium tuberculosis variant africanum strain:MAFBRA00707

Whole Genome Sequencing of Mycobacterium africanum reported in Brazil

Taxonomy:: Mycobacterium tuberculosis variant africanum

: Project data type: Genome sequencing

Scope:: Monoisolate

Universidade Federal do Rio de Janeiro

Accession:: PRJNA534674
ID:: 534674

Select item 47965011.

Mali MDR-TB Genomics WANETAM

The rise of virulent genotypes and an emerging threat of multidrug resistant tuberculosis in Bamako, Mali

: Project data type: Other

Scope:: Monoisolate

BIRMINGHAM UNIVERSITY

Accession:: PRJEB27446
ID:: 479650

Select item 47396312.

Mycobacterium africanum L5

Genomic diversity in Mycobacterium Lineage 5

: Project data type: Other

Scope:: Monoisolate

DST/NRF Centre of Excellence for Biomedical TB research, SAMRC Centre for TB Research

Accession:: PRJEB25506
ID:: 473963

Select item 42746113.

MAF2

Maf diversity in Ghana

: Project data type: Other

Scope:: Monoisolate

Swiss Tropical and Public Health Institute, Switzerland

Accession:: PRJEB23179
ID:: 427461

Select item 40151514.

Mycobacteria species

Mycobacteria species Raw sequence reads

: Project data type: Raw sequence reads

Scope:: Multiisolate

Oxford University

Accession:: PRJNA401515
ID:: 401515

Select item 35722515.

Whole genome sequencing of MTBC from South-western Nigeria.

Whole-genome sequencing illuminates the evolution and spread of multidrug-resistant tuberculosis in Southwest Nigeria

: Project data type: Other

Scope:: Monoisolate

BIRMINGHAM UNIVERSITY

Accession:: PRJEB15857
ID:: 357225

Select item 31044116.

MTBC Lineages

Genomic evidence for lineage-specific adaptation in Mycobacterium tuberculosis

: Project data type: Other

Scope:: Monoisolate

Swiss Tropical and Public Health Institute, Switzerland

Accession:: PRJEB9003
ID:: 310441

Select item 26345617.

Mycobacterium africanum genome sequencing

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB2159
ID:: 263456

Select item 24016118.

Mycobacterium tuberculosis variant africanum strain:MAL020148

TB-ARC - Mali

Taxonomy:: Mycobacterium tuberculosis variant africanum

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Broad Institute

Accession:: PRJNA240161
ID:: 240161

Select item 24015819.

Mycobacterium tuberculosis variant africanum strain:MAL010084

TB-ARC - Mali

Taxonomy:: Mycobacterium tuberculosis variant africanum

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Broad Institute

Accession:: PRJNA240158
ID:: 240158

Select item 23955520.

Genomics_of_Mycobacterium_africanum_on_the_global_and_local_scale

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB4884
ID:: 239555

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