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Genome Information for Geminocystis
When bacteria with a single chromosome, such as Escherichia coli, grow rapidly in nutrient-rich media, DNA is replicated in a multifork mode, and the oriC/ter ratio becomes >2 yielding a V-shaped profile in the depth of high-throughput sequencing reads (lowest at ter and highest at oriC).
More...When bacteria with a single chromosome, such as Escherichia coli, grow rapidly in nutrient-rich media, DNA is replicated in a multifork mode, and the oriC/ter ratio becomes >2 yielding a V-shaped profile in the depth of high-throughput sequencing reads (lowest at ter and highest at oriC). For cyanobacteria possessing multiple copies of chromosomes, in which only one or a few copies are replicated from oriC, the oriC/ter ratio approximates 1.0, but still exhibits a slightly V-shaped profile in Synechococcus elongatus PCC 7942. In order to identify the replication origin in Geminocystis sp. NIES-3708, genomic DNA was extracted from the exponentially or stationary phase cultures and analyzed using an Illumina MiSeq System.
Less...| Accession | PRJDB9464 |
| Data Type | Genome sequencing |
| Scope | Monoisolate |
| Organism | Geminocystis sp. NIES-3708[Taxonomy ID: 1615909] Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Chroococcales; Geminocystaceae; Geminocystis; Geminocystis sp. NIES-3708 |
| Submission | Registration date: 13-Mar-2020
Center for Biosystems Dynamics Research (BDR), RIKEN |
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