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Accession: PRJNA59457 ID: 59457

Hypersaline Lake Metagenome

Hypersaline water microbial communities from Lake Tyrrell, Victoria, Australia

AccessionPRJNA59457
TypeUmbrella project
Organismhypersaline lake metagenome[Taxonomy ID: 904678]
unclassified sequences; metagenomes; ecological metagenomes; hypersaline lake metagenome
SubmissionRegistration date: 22-Oct-2010
University of California, San Diego, Scripps Institution of Oceanography
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)25183
WGS master18
Genomic DNA4760
SRA Experiments15
Protein Sequences43554
Publications
PubMed4
PMC4
Other datasets
BioSample18
PopSet2
Assembly18
SRA Data Details
ParameterValue
Data volume, Gbases3
Data volume, Mbytes6601
Hypersaline Lake Metagenome encompasses the following 22 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds
Contigs
Total

17
1
18
BioProject
accession
Assembly
level
OrganismTitle
PRJNA198495 ContigsCandidatus Halobonum tyrrellensis G22Candidatus Halobonum tyrrellensis G22 Genome sequencing and assembly (Scripps Institution of Oceanography,...)
PRJNA52647 ScaffoldsCandidatus Nanosalina sp. J07AB43Candidatus Nanosalina sp. J07AB43 Metagenomic Assembly (University of California,...)
PRJNA52645 ScaffoldsCandidatus Nanosalinarum sp. J07AB56Candidatus Nanosalinarum sp. J07AB56 Metagenomic Assembly (University of California,...)
PRJNA70847 ScaffoldsHalonotius sp. J07HN4Halonotius sp. J07HN4 Genome sequencing and assembly (University of California...)
PRJNA176228 ScaffoldsHalonotius sp. J07HN6Halonotius sp. J07HN6 Metagenomic Assembly (University of California,...)
List all 18 'Genome sequencing' projects...
Targeted Locus (Loci)1
BioProject
accession
OrganismTitle
PRJNA68587uncultured archaeonUncultured archaeon 16S rRNA Targeted Locus (University of California,...)
metagenome3
BioProject
accession
OrganismTitle
PRJNA230525hypersaline lake metagenomeHypersaline water sample Lake Tyrrell, Victoria, Australia August 2007 Metagenome (University of California,...)
PRJNA230528hypersaline lake metagenomeHypersaline water sample Lake Tyrrell, Victoria, Australia, January 2007 Metagenome (University of California,...)
PRJNA388720hypersaline lake metagenomeHypersaline water microbial community from Lake Tyrrell, Victoria, Australia January 2009 (University of California,...)

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    Hypersaline water microbial communities from Lake Tyrrell, Victoria, Australia
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