Mycobacterium (ID 354248) - BioProject

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Accession: PRJNA354248 ID: 354248

Mycobacterium

Reference genomes of nontuberculos Mycobacterium species Genome sequencing and assembly

To determine the WGS of multiple nontuberculous mycobacteria not yet present in GenBank, with the aim of inferring a genome-based phylogeny of the genus Mycobacterium

Accession	PRJNA354248
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Mycobacterium[Taxonomy ID: 1763] Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium
Publications	Tortoli E et al., "The new phylogeny of the genus Mycobacterium: The old and the news.", Infect Genet Evol, 2017 Dec;56:19-25
Submission	Registration date: 11-Apr-2017 San Raffaele Scientific Institute
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	8210
WGS master	47
Protein Sequences	245139
Publications
PubMed	1
Other datasets
BioSample	48
Assembly	47

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

47
47

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002086635.1	MVHD00000000	SAMN06064226	DSM 45230	Mycobacterium alsense
GCA_002086155.1	MVHE00000000	SAMN06064227	DSM 45057	Mycobacterium angelicum
GCA_002086485.1	MVHF00000000	SAMN06064228	RW6	Mycobacterium aquaticum
GCA_002086125.1	MVHG00000000	SAMN06064229	DSM 45069	Mycobacterium arosiense ATCC BAA-1401 = DSM 45069
GCA_002086545.1	MVHI00000000	SAMN06064231	DSM 44297	Mycobacterium asiaticum DSM 44297
GCA_002086165.1	MVHL00000000	SAMN06064234	DSM 45439	Mycobacterium bouchedurhonense
GCA_002086575.1	MVHM00000000	SAMN06064235	DSM 44624	Mycobacterium branderi
GCA_002742165.1	PDKV00000000	SAMN07733418	NCTC 12882	Mycobacterium celatum
GCA_002104675.1	NCXP00000000	SAMN06651657	TBL 1200985	Mycobacterium decipiens
GCA_002086215.1	MVHR00000000	SAMN06064240	DSM 44471	Mycobacterium heidelbergense
GCA_002086275.1	MVHT00000000	SAMN06064242	DSM 44049	Mycobacterium intermedium
GCA_002086305.1	MVHV00000000	SAMN06064244	IP1130001	Mycobacterium malmoense
GCA_002086335.1	MVHW00000000	SAMN06064245	DSM 45255	Mycobacterium mantenii
GCA_002086345.1	MVHX00000000	SAMN06064246	DSM 45437	Mycobacterium marseillense
GCA_002086415.1	MVIC00000000	SAMN06064252	DSM 45145	Mycobacterium noviomagense
GCA_002104735.1	NCXN00000000	SAMN06651659	KCTC 29084	Mycobacterium paraintracellulare
GCA_002086475.1	MVIE00000000	SAMN06064254	DSM 45000	Mycobacterium paraseoulense
GCA_002086675.1	MVIF00000000	SAMN06064255	AFPC-000227	Mycobacterium persicum
GCA_002086735.1	MVIJ00000000	SAMN06064259	DSM 43992	Mycobacterium scrofulaceum
GCA_002086755.1	MVIK00000000	SAMN06064260	CCUG 53584	Mycobacterium shinjukuense
GCA_002086775.1	MVIL00000000	SAMN06064261	CCUG 56329	Mycobacterium timonense
GCA_002086525.1	MVHK00000000	SAMN06064233	CIP108541	Mycobacteroides abscessus subsp. bolletii
GCA_002086375.1	MVHY00000000	SAMN06064247	CCUG 48898	Mycobacteroides abscessus subsp. massiliense
GCA_002086225.1	MVHQ00000000	SAMN06064239	DSM 45524	Mycobacteroides franklinii
GCA_002086715.1	MVII00000000	SAMN06064258	CCUG 66554	Mycobacteroides saopaulense
GCA_002104795.1	NCXO00000000	SAMN06651658	KCTC 19819	Mycolicibacillus koreensis
GCA_002086455.1	MVHC00000000	SAMN06064225	DSM 45454	Mycolicibacter algericus DSM 45454
GCA_002086515.1	MVHH00000000	SAMN06064230	DSM 44942	Mycolicibacter arupensis
GCA_002086285.1	MVHU00000000	SAMN06064243	DSM 45093	Mycolicibacter kumamotonensis
GCA_002086405.1	MVHZ00000000	SAMN06064248	DSM 45633	Mycolicibacter minnesotensis
GCA_002553505.1	PDCP00000000	SAMN07733415	CCUG37673	Mycolicibacterium agri
GCA_002086115.1	MVHJ00000000	SAMN06064232	DSM 45578	Mycolicibacterium bacteremicum
GCA_002553535.1	PDCO00000000	SAMN07733416	CCUG47580	Mycolicibacterium boenickei
GCA_002553575.2	PDCN00000000	SAMN07733417	CIP1034565	Mycolicibacterium brumae
GCA_002086175.1	MVHN00000000	SAMN06064236	DSM 46765	Mycolicibacterium celeriflavum
GCA_002086595.1	MVHO00000000	SAMN06064237	DSM 44219	Mycolicibacterium chubuense
GCA_002553495.1	PDCR00000000	SAMN07710578	IP141170001	Mycolicibacterium diernhoferi
GCA_002553585.1	PDCQ00000000	SAMN07710579	IP141180004	Mycolicibacterium duvalii
GCA_002086605.1	MVHP00000000	SAMN06064238	FI-09383	Mycolicibacterium elephantis
GCA_002086255.1	MVHS00000000	SAMN06064241	DSM 45130	Mycolicibacterium insubricum
GCA_002086655.1	MVIA00000000	SAMN06064249	DSM 44395	Mycolicibacterium monacense DSM 44395
GCA_002086395.1	MVIB00000000	SAMN06064251	CIP105393	Mycolicibacterium moriokaense
GCA_002086815.1	MVID00000000	SAMN06064253	CCUG 20999	Mycolicibacterium parafortuitum
GCA_002086835.1	MVIG00000000	SAMN06064256	IP141460001	Mycolicibacterium porcinum
GCA_002086695.1	MVIH00000000	SAMN06064257	DSM 44223	Mycolicibacterium rhodesiae
GCA_002086795.1	MVIM00000000	SAMN06064262	DSM 44338	Mycolicibacterium tusciae
GCA_002104765.1	NCXM00000000	SAMN06651660	DSM 45247	Mycolicibacterium vulneris

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Reference genomes of nontuberculos Mycobacterium species Genome sequencing and assembly

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