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ASM18330v1

Organism name:
Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) (enterobacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: JF98
BioSample:
SAMN02604268
BioProject:
PRJNA43511
Submitter:
University of York
Date:
2010/11/04
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
Excluded from RefSeq:
  • many frameshifted proteins
GenBank assembly accession:
GCA_000183305.1 (latest)
RefSeq assembly accession:
GCF_000183305.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 370378 [UID] 232368 [GenBank] 370378 [RefSeq]

See Genome Information for Buchnera aphidicola

There are 125 assemblies for this organism

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History (Show revision history)

Comment

Annotation was added by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length641,771
Total ungapped length641,771
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_000183315.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP002303.1=NC_017254.1

Assembly statistics

MoleculeTotal
Length
Chromosome 641,771

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)Buchnera aphidicola

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000007365.1Buchnera aphidicola str. Sg (Schizaphis graminum)suspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000007365.1Buchnera aphidicolasuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type80.2432.7232.74
Best-match type80.2432.7232.74

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-matchna