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IDs: 38068 [UID] 17768 [GenBank] 38068 [RefSeq]
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ URL -- http://www.jgi.doe.gov JGI Project ID: 3634512 Source DNA and bacteria available from Hans Blaschek (blaschek@uiuc.edu) Bacteria available from NCIMB: NCIMB 8052 Contacts: Hans ... Blaschek (blaschek@uiuc.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) more
##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeqAnnotation Name::GCF_000016965.1-RS_2024_03_29Annotation Date::03/29/2024 09:18:03Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)Annotation Method::Best-placed reference protein set; GeneMarkS-2+Annotation Software revision::6.7Features Annotated::Gene; CDS; rRNA; tRNA; ncRNAGenes (total)::5,413CDSs (total)::5,270Genes (coding)::5,207CDSs (with protein)::5,207Genes (RNA)::143rRNAs::15, 14, 14 (5S, 16S, 23S)complete rRNAs::15, 14, 14 (5S, 16S, 23S)tRNAs::94ncRNAs::6Pseudo Genes (total)::63CDSs (without protein)::63Pseudo Genes (ambiguous residues)::0 of 63Pseudo Genes (frameshifted)::30 of 63Pseudo Genes (incomplete)::37 of 63Pseudo Genes (internal stop)::16 of 63Pseudo Genes (multiple problems)::16 of 63##Genome-Annotation-Data-END##
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