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Source database (GenBank or RefSeq) File type

ASM289129v1

Organism name:: Streptomyces eurocidicus (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: ATCC 27428
BioSample:: SAMN03941210
BioProject:: PRJNA291301
Submitter:: Oak Ridge National Laboratory
Date:: 2018/01/17
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
RefSeq category:: representative genome
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_002891295.1 (latest)
RefSeq assembly accession:: GCF_002891295.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: LGUI01
Assembly method:: SPAdes v. 3.0; SMRT Analysis v. 2.3.0; CISA v. 1.3
Expected final version:: yes
Genome coverage:: 220.0x
Sequencing technology:: Illumina MiSeq; PacBio

IDs: 1528621 [UID] 5903578 [GenBank] 5920108 [RefSeq]

See Genome Information for Streptomyces eurocidicus

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_002891295.1	=	GCF_002891295.1	ASM289129v1	Contig	Latest GenBank, Latest RefSeq

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI
Annotation Date::07/29/2015 12:57:35
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method::Best-placed reference protein set; GeneMarkS+
Annotation Software revision::2.10
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes::6,641
CDS::5,993
Pseudo Genes::528
CRISPR Arrays::1
rRNAs::9 (5S, 16S, 23S)
tRNAs::72
ncRNA::39
Frameshifted Genes::115
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	7,931,574
Total ungapped length	7,931,574
Number of contigs	18
Contig N50	801,731
Contig L50	4
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	18

	ANI	Query coverage	Subject coverage
Declared type	99.98	99.49	99.81
Best-match type	99.98	99.49	99.81

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ASM289129v1

See Genome Information for Streptomyces eurocidicus

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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