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Source database (GenBank or RefSeq) File type

ASM27468v1

Organism name:

Helicobacter pylori CPY6261 (e-proteobacteria)

Taxonomy check:

Infraspecific name:

Strain: CPY6261

BioSample:

SAMN00777167

BioProject:

PRJNA64065

Submitter:

Institute for Genome Sciences

Date:

2012/06/28

Assembly type:

Assembly level:

Contig

Genome representation:

full

Excluded from RefSeq:

many frameshifted proteins

GenBank assembly accession:

GCA_000274685.1 (latest)

RefSeq assembly accession:

GCF_000274685.1 (suppressed)

RefSeq assembly and GenBank assembly identical:

yes

WGS Project:

AKNO01

Assembly method:

Celera Assembler v. 6.1

Genome coverage:

61.50x

Sequencing technology:

Illumina;454

IDs: 486508 [UID] 393978 [GenBank] 486508 [RefSeq]

See Genome Information for Helicobacter pylori

Pathogen Detection Resources

There are 4493 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000274685.1	=	GCF_000274685.1	ASM27468v1	Contig	Latest GenBank, RefSeq suppressed

Comment

Samples deposited at Biodefense and Emerging Infections Research Resources Repository (BEI resources)

Global statistics

Total sequence length	1,608,996
Total ungapped length	1,608,996
Number of contigs	5
Contig N50	915,972
Contig L50	1
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	5

	ANI	Query coverage	Subject coverage
Declared type	96.40	94.78	89.88
Best-match type	96.40	94.78	89.88

Assembly

Genome Assembly

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Download Assembly

ASM27468v1

See Genome Information for Helicobacter pylori

Pathogen Detection Resources

There are 4493 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

Related Information

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Global assembly definition

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Assembly QA

Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result