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ASM19148v1

Organism name:
Neisseria meningitidis M01-240355 (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: M01-240355
BioSample:
SAMN02604196
BioProject:
PRJNA61063
Submitter:
University of Maryland School of Medicine
Date:
2011/03/04
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000191485.1 (latest)
RefSeq assembly accession:
GCF_000191485.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 375828 [UID] 248548 [GenBank] 375828 [RefSeq]

See Genome Information for Neisseria meningitidis

There are 8132 assemblies for this organism

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History (Show revision history)

Comment

Source DNA available from Duccio Medini, Norvartis Vaccines and Diagnostics (duccio.medini@novartis.com)
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Name::GCF_000191485.1-RS_2024_03_27
Annotation Date::03/27/2024 00:51:58
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.7
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::2,282
CDSs (total)::2,208
Genes (coding)::2,035
CDSs (with protein)::2,035
Genes (RNA)::74
rRNAs::4, 4, 4 (5S, 16S, 23S)
complete rRNAs::4, 4, 4 (5S, 16S, 23S)
tRNAs::58
ncRNAs::4
Pseudo Genes (total)::173
CDSs (without protein)::173
Pseudo Genes (ambiguous residues)::0 of 173
Pseudo Genes (frameshifted)::62 of 173
Pseudo Genes (incomplete)::116 of 173
Pseudo Genes (internal stop)::21 of 173
Pseudo Genes (multiple problems)::26 of 173
CRISPR Arrays::1
##Genome-Annotation-Data-END##

Global statistics

Total sequence length2,287,777
Total ungapped length2,287,777
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000191495.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP002422.1=NC_017517.1

Assembly statistics

MoleculeTotal
Length
Chromosome 2,287,777

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Neisseria meningitidis M01-240355Neisseria meningitidis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900638555.1Neisseria meningitidistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900638555.1Neisseria meningitidistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.3487.7891.86
Best-match type97.3487.7891.86

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna