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ASM17545v1

Organism name:
Haemophilus influenzae RdAW (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: RdAW
BioSample:
SAMN02595335
BioProject:
PRJNA39127
Submitter:
Broad Institute
Date:
2009/09/29
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000175455.1 (latest)
RefSeq assembly accession:
GCF_000175455.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ACSM01

IDs: 218998 [UID] 218978 [GenBank] 218998 [RefSeq]

See Genome Information for Haemophilus influenzae

Pathogen Detection Resources

There are 1333 assemblies for this organism

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History (Show revision history)

Comment

Genome Coverage: 48.23x
Sequencing Technology: 454

Global statistics

Total sequence length1,802,170
Total ungapped length1,802,170
Number of contigs32
Contig N50131,858
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)32

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,802,170321,802,170131,85800

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Haemophilus influenzae RdAWHaemophilus influenzae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001457655.1Haemophilus influenzaetype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001457655.1Haemophilus influenzaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.4491.2186.95
Best-match type97.4491.2186.95

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna