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IDs: 248008 [UID] 202318 [GenBank] 248008 [RefSeq]
URL -- http://www.jgi.doe.gov JGI Project ID: 4087033 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution ... and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ more
##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeqAnnotation Date::02/25/2024 07:21:30Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)Annotation Method::Best-placed reference protein set; GeneMarkS-2+Annotation Software revision::6.6Features Annotated::Gene; CDS; rRNA; tRNA; ncRNAGenes (total)::2,718CDSs (total)::2,657Genes (coding)::2,578CDSs (with protein)::2,578Genes (RNA)::61rRNAs::3, 3, 3 (5S, 16S, 23S)complete rRNAs::3, 3, 3 (5S, 16S, 23S)tRNAs::48ncRNAs::4Pseudo Genes (total)::79CDSs (without protein)::79Pseudo Genes (ambiguous residues)::0 of 79Pseudo Genes (frameshifted)::48 of 79Pseudo Genes (incomplete)::52 of 79Pseudo Genes (internal stop)::29 of 79Pseudo Genes (multiple problems)::40 of 79CRISPR Arrays::11##Genome-Annotation-Data-END##
##MIGS-Data-START##investigation_type::bacteria_archaeaproject_name::Caldicellulosiruptor kristjanssonii 177R1B, DSM 12137collection_date::Missinglat_lon::Missingdepth::Missingalt_elev::Missingcountry::Icelandenvironment::Hot springnum_replicons::2ref_biomaterial::DSM 12137biotic_relationship::Free livingtrophic_level::Missingrel_to_oxygen::Anaerobeisol_growth_condt::Missingsequencing_meth::WGSassembly::Newbler v. 2.3 (pre-release)finishing_strategy::FinishedGOLD Stamp ID::Gi07643Type Strain::YesIsolation Site::Hot spring biomat; IcelandCell Shape::Rod-shapedSporulation::NonsporulatingTemperature Range::ThermophileGram Staining::Gram-Diseases::None##MIGS-Data-END##
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