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ASM17455v1

Organism name:
Staphylococcus aureus A9299 (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: A9299
BioSample:
SAMN02595322
BioProject:
PRJNA36475
Submitter:
Broad Institute
Date:
2009/09/11
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000174555.1 (latest)
RefSeq assembly accession:
GCF_000174555.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ACKH01

IDs: 217198 [UID] 217178 [GenBank] 217198 [RefSeq]

See Genome Information for Staphylococcus aureus

Pathogen Detection Resources

There are 90982 assemblies for this organism

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History (Show revision history)

Comment

Genome Coverage: 17.04x
Sequencing Technology: 454

Global statistics

Total sequence length2,782,181
Total ungapped length2,782,181
Number of contigs48
Contig N50171,469
Contig L506
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)48

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,782,181482,782,181171,46900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Staphylococcus aureus A9299Staphylococcus aureus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000330825.2Staphylococcus aureus subsp. aureus DSM 20231type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000330825.2Staphylococcus aureustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.9693.8794.75
Best-match type98.9693.8794.75

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna