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Fv_myxofaciens_P3G_1.0

Organism name:
Ferrovum myxofaciens (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: P3G
BioSample:
SAMN02929444
BioProject:
PRJNA255880
Submitter:
Fundacion Ciencia & Vida
Date:
2014/07/28
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000735045.1 (latest)
RefSeq assembly accession:
GCF_000735045.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JPOQ01
Assembly method:
Velvet v. 1.2.10
Expected final version:
no
Genome coverage:
83.0x
Sequencing technology:
Illumina MiSeq

IDs: 200951 [UID] 1180508 [GenBank] 1318818 [RefSeq]

See Genome Information for Ferrovum myxofaciens

There are 8 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,702,191
Total ungapped length2,702,191
Number of contigs646
Contig N5032,564
Contig L5021
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)646

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,702,1916462,702,19132,56400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Ferrovum myxofaciensFerrovum myxofaciens

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_021654335.1Sideroxyarcus emersoniitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type88.970.210.20

ANI result

Taxonomy check statusBest match statusComment
OKlow-coverageAssembly is the type-strain, no match is expected