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ASM6034v1

Organism name:
Christiangramia forsetii KT0803 (CFB group bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: KT0803
BioSample:
SAMEA2272667
BioProject:
PRJEA19061
Submitter:
Max Planck Institute for Molecular Genetics
Date:
2006/11/06
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000060345.1 (latest)
RefSeq assembly accession:
GCF_000060345.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 78948 [UID] 353638 [GenBank] 78948 [RefSeq]

See Genome Information for Christiangramia forsetii

There are 2 assemblies for this organism

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History (Show revision history)

Comment

This project was carried out by
*Max Planck Institute for Molecular Genetics, Berlin, Germany; *Max Planck Institute for Marine Microbiology, Bremen, Germany; -------------- Genome Center
 Center: Max Planck Institute for Molecular Genetics 
 Center code: MPIMG
-------------- Annotation
 Center: Max Planck ... Institute for Marine Microbiology 
 Celsiusstrasse 1, D-28359 Bremen, Germany. 
 Center Code: MPIMM
--------------
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/  more

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Name::GCF_000060345.1-RS_2024_04_15
Annotation Date::04/15/2024 00:46:52
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.7
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::3,470
CDSs (total)::3,412
Genes (coding)::3,395
CDSs (with protein)::3,395
Genes (RNA)::58
rRNAs::3, 3, 3 (5S, 16S, 23S)
complete rRNAs::3, 3, 3 (5S, 16S, 23S)
tRNAs::45
ncRNAs::4
Pseudo Genes (total)::17
CDSs (without protein)::17
Pseudo Genes (ambiguous residues)::0 of 17
Pseudo Genes (frameshifted)::4 of 17
Pseudo Genes (incomplete)::10 of 17
Pseudo Genes (internal stop)::5 of 17
Pseudo Genes (multiple problems)::2 of 17
##Genome-Annotation-Data-END##

Global statistics

Total sequence length3,798,465
Total ungapped length3,798,465
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000060355.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CU207366.1=NC_008571.1

Assembly statistics

MoleculeTotal
Length
Chromosome 3,798,465

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Christiangramia forsetii KT0803Christiangramia forsetii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_014642775.1Christiangramia forsetiitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014642775.1Christiangramia forsetiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9998.9699.99
Best-match type99.9998.9699.99

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna