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URL -- http://www.jgi.doe.gov
JGI Project ID: 2662180
Source DNA and bacteria available from Bart Weimer (milkbugs@cc.usu.edu)
Contacts: Bart Weimer (milkbugs@cc.usu.edu)
 Larry McKay (lmckay@umn.edu)
 Paul Richardson (microbes@cuba.jgi-psf.org)
Annotation done by Kira Makarova and Eugene Koonin
Finishing done by Fidelity Systems Inc. (Gaithersburg)
http://www.fidelitysystems.com
Project Information available at: ... http://genome.jgi-psf.org/mic_home.html
The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them.
(http://www.genome.gov/page.cfm?pageID=10506376)
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/  more

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::09/18/2023 01:27:02
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::2,687
CDSs (total)::2,603
Genes (coding)::2,445
CDSs (with protein)::2,445
Genes (RNA)::84
rRNAs::7, 6, 6 (5S, 16S, 23S)
complete rRNAs::7, 6, 6 (5S, 16S, 23S)
tRNAs::62
ncRNAs::3
Pseudo Genes (total)::158
CDSs (without protein)::158
Pseudo Genes (ambiguous residues)::0 of 158
Pseudo Genes (frameshifted)::88 of 158
Pseudo Genes (incomplete)::45 of 158
Pseudo Genes (internal stop)::43 of 158
Pseudo Genes (multiple problems)::17 of 158
##Genome-Annotation-Data-END##

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