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ASM87611v1

Organism name:
Acinetobacter sp. NBRC 110496 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NBRC 110496
BioSample:
SAMD00020359
BioProject:
PRJDB1754
Submitter:
National Institute of Technology and Evaluation
Date:
2015/02/10
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000876115.1 (latest)
RefSeq assembly accession:
GCF_000876115.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BBTF01
Assembly method:
newbler v. 2.6
Genome coverage:
89x
Sequencing technology:
Illumina HiSeq 1000

IDs: 271971 [UID] 1571788 [GenBank] 1646088 [RefSeq]

See Genome Information for Acinetobacter sp. NBRC 110496

History (Show revision history)

Comment



Strain NBRC 110496 available from NBRC culture collection (http://www.nbrc.nite.go.jp/e/).
Members of the genus Acinetobacter are attractive target for genome sequencing due to their clinical importance, metabolic versatility, and ubiquitous distribution in environment. This project aims to support epidemiological studies and ... biotechnological research of Acinetobacter spp. by providing genome sequence data through the NBRC web site and DDBJ/EMBL/GeneBank databases.
(http://www.bio.nite.go.jp/ngac/e/project_wgs-e.html)  more

Global statistics

Total sequence length4,403,056
Total ungapped length4,403,056
Number of contigs165
Contig N5076,999
Contig L5018
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)165

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,403,0561654,403,05676,99900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter sp. NBRC 110496Acinetobacter sp. NBRC 110496

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000413935.1Acinetobacter colistiniresistenstype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type95.1674.0883.96

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna