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Doro.v1.0

Organism name:
Streptomyces sp. NRRL B-3253 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL B-3253
BioSample:
SAMN02645459
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/15
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000725635.1 (latest)
RefSeq assembly accession:
GCF_000725635.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOGQ01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
226x
Sequencing technology:
Illumina

IDs: 196071 [UID] 1169598 [GenBank] 1174258 [RefSeq]

See Genome Information for Streptomyces sp. NRRL B-3253

Pathogen Detection Resources

History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length6,992,994
Total ungapped length6,992,845
Gaps between scaffolds0
Number of scaffolds123
Scaffold N50243,609
Scaffold L5010
Number of contigs127
Contig N50243,609
Contig L5010
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)127

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced6,992,9941236,992,845243,60940

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. NRRL B-3253Streptomyces sp. NRRL B-3253

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_004195735.1Streptomyces albidoflavustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type99.1494.2694.58

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna