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ASM69916v1

Organism name:
Serratia liquefaciens FK01 (enterobacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: FK01
BioSample:
SAMD00016897
BioProject:
PRJDB1632
Submitter:
Kyushu University
Date:
2014/05/29
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000699165.1 (latest)
RefSeq assembly accession:
GCF_000699165.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BAZB01
Assembly method:
Velvet v. 1.2.03
Genome coverage:
25.8x
Sequencing technology:
MiSeq

IDs: 182801 [UID] 1104538 [GenBank] 1663098 [RefSeq]

See Genome Information for Serratia liquefaciens

There are 119 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length5,280,113
Total ungapped length5,279,587
Gaps between scaffolds0
Number of scaffolds28
Scaffold N503,043,604
Scaffold L501
Number of contigs49
Contig N50325,065
Contig L506
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)49

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,280,113285,279,5873,043,604210

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Serratia liquefaciens FK01Serratia liquefaciens

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000422085.1Serratia liquefaciens ATCC 27592type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000422085.1Serratia liquefacienstype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type95.1690.3690.31
Best-match type95.1690.3690.31

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-matchna