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Source database (GenBank or RefSeq) File type

gbb60v01

Description:: Bordetella bronchiseptica A1-7 v01
Organism name:: Bordetella bronchiseptica A1-7 (b-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: A1-7
BioSample:: SAMN02614573
Submitter:: JCVI
Date:: 2014/05/12
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
GenBank assembly accession:: GCA_000690335.1 (latest)
RefSeq assembly accession:: GCF_000690335.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JGWO01
Assembly method:: Celera v. 7.0
Expected final version:: yes
Genome coverage:: 13x
Sequencing technology:: Illumina MiSeq

IDs: 178201 [UID] 1068798 [GenBank] 1638158 [RefSeq]

See Genome Information for Bordetella bronchiseptica

Pathogen Detection Resources

There are 104 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000690335.1	=	GCF_000690335.1	gbb60v01	Contig	Latest GenBank, Latest RefSeq

Comment

This project has been funded in whole or in part with federal funds from the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services through the Genomic Sequencing Centers for Infectious ... Diseases under contract number HHSN272200900007C.  more

Global statistics

Total sequence length	5,265,200
Total ungapped length	5,265,200
Number of contigs	184
Contig N50	51,824
Contig L50	32
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	184

	ANI	Query coverage	Subject coverage
Declared type	99.22	94.72	96.40
Best-match type	99.22	94.72	96.40

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gbb60v01

See Genome Information for Bordetella bronchiseptica

Pathogen Detection Resources

There are 104 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

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Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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