Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

ASM71397v1

Organism name:: Escherichia coli 4-203-08_S1_C3 (E. coli)
Taxonomy check:: OK
Infraspecific name:: Strain: 4-203-08_S1_C3
BioSample:: SAMN02680223
BioProject:: PRJNA233770
Submitter:: IGS
Date:: 2014/06/27
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
GenBank assembly accession:: GCA_000713975.1 (latest)
RefSeq assembly accession:: GCF_000713975.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JOQG01
Assembly method:: MaSuRCA v. 2.0.3.1
Genome coverage:: 117.38x
Sequencing technology:: Illumina

IDs: 190201 [UID] 1152398 [GenBank] 1337858 [RefSeq]

See Genome Information for Escherichia coli

Pathogen Detection Resources

There are 266864 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000713975.1	=	GCF_000713975.1	ASM71397v1	Contig	Latest GenBank, Latest RefSeq

Comment

Bacteria and source DNA available from BEI

Global statistics

Total sequence length	5,302,353
Total ungapped length	5,302,353
Number of contigs	167
Contig N50	138,743
Contig L50	12
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	167

	ANI	Query coverage	Subject coverage
Declared type	99.33	86.03	85.65
Best-match type	99.33	86.03	85.65

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Download Assembly

ASM71397v1

See Genome Information for Escherichia coli

Pathogen Detection Resources

There are 266864 assemblies for this organism

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Global assembly definition

Assembly statistics

Assembly QA

Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result