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Myco_tube_TB_RSA178_V1

Organism name:: Mycobacterium tuberculosis TB_RSA178 (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: TB_RSA178
BioSample:: SAMN02403619
BioProject:: PRJNA228173
Submitter:: Broad Institute
Date:: 2014/05/03
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000676815.1 (latest)
RefSeq assembly accession:: GCF_000676815.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JKQV01
Assembly method:: allpaths v. R48559
Genome coverage:: 74.0x
Sequencing technology:: Illumina

IDs: 171381 [UID] 1053778 [GenBank] 1231358 [RefSeq]

See Genome Information for Mycobacterium tuberculosis

Pathogen Detection Resources

There are 7611 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000676815.1	=	GCF_000676815.1	Myco_tube_TB_RSA178_V1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length	4,411,486
Total ungapped length	4,389,303
Gaps between scaffolds	0
Number of scaffolds	8
Scaffold N50	3,396,138
Scaffold L50	1
Number of contigs	27
Contig N50	312,570
Contig L50	6
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	27

	ANI	Query coverage	Subject coverage
Declared type	99.92	99.17	98.67
Best-match type	99.92	99.17	98.67

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Myco_tube_TB_RSA178_V1

See Genome Information for Mycobacterium tuberculosis

Pathogen Detection Resources

There are 7611 assemblies for this organism

History (Show revision history)

Comment

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Average Nucleotide Identity (ANI) data

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