Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

Pseu_aeru_BL07_V1

Organism name:: Pseudomonas aeruginosa BL07 (g-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: BL07
BioSample:: SAMN02360720
BioProject:: PRJNA219910
Submitter:: Broad Institute
Date:: 2013/10/24
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000481005.1 (latest)
RefSeq assembly accession:: GCF_000481005.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AXPT01
Assembly method:: allpaths v. R47552
Genome coverage:: 137.0x
Sequencing technology:: Illumina

IDs: 70941 [UID] 825408 [GenBank] 830968 [RefSeq]

See Genome Information for Pseudomonas aeruginosa

Pathogen Detection Resources

There are 30458 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000481005.1	=	GCF_000481005.1	Pseu_aeru_BL07_V1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length	6,556,485
Total ungapped length	6,490,977
Gaps between scaffolds	0
Number of scaffolds	9
Scaffold N50	4,579,559
Scaffold L50	1
Number of contigs	29
Contig N50	911,952
Contig L50	3
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	29

	ANI	Query coverage	Subject coverage
Declared type	99.44	94.75	95.45
Best-match type	99.44	94.75	95.45

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Download Assembly

Pseu_aeru_BL07_V1

See Genome Information for Pseudomonas aeruginosa

Pathogen Detection Resources

There are 30458 assemblies for this organism

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Global assembly definition

Assembly statistics

Assembly QA

Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result