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SB4536_2858

Organism name:
Klebsiella pneumoniae subsp. pneumoniae T69 (enterobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: T69
BioSample:
SAMEA3138865
BioProject:
PRJEB4362
Submitter:
INSTITUT PASTEUR
Date:
2014/01/15
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000529775.1 (latest)
RefSeq assembly accession:
GCF_000529775.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CBTV01
Genome coverage:
139x

IDs: 97701 [UID] 903518 [GenBank] 1346238 [RefSeq]

See Genome Information for Klebsiella pneumoniae

Pathogen Detection Resources

There are 65507 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length5,486,528
Total ungapped length5,463,228
Gaps between scaffolds0
Number of scaffolds1
Scaffold N505,486,528
Scaffold L501
Number of contigs234
Contig N5039,422
Contig L5042
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)234

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced5,486,52815,463,2285,486,5282330

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Klebsiella pneumoniae subsp. pneumoniae T69Klebsiella pneumoniae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_006364295.1Klebsiella pneumoniaetype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_006364295.1Klebsiella pneumoniaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.1889.0887.32
Best-match type99.1889.0887.32

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna