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Bruc_abor_biovar_2_90-0737_V1

Organism name:
Brucella abortus 90-0737 ("Bacillus of abortion" Bang 1897)
Taxonomy check:
OK
Infraspecific name:
Strain: 90-0737
Isolate:
2
BioSample:
SAMN02092515
BioProject:
PRJNA200935
Submitter:
Broad Institute
Date:
2013/06/21
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000413695.1 (latest)
RefSeq assembly accession:
GCF_000413695.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ATGT01
Assembly method:
allpaths v. R45879
Genome coverage:
341.0x
Sequencing technology:
Illumina

IDs: 709008 [UID] 709008 [GenBank] 717608 [RefSeq]

See Genome Information for Brucella abortus

There are 395 assemblies for this organism

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History (Show revision history)

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length3,286,408
Total ungapped length3,286,408
Number of contigs4
Contig N501,694,005
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)4

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,286,40843,286,4081,694,00500

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Brucella abortus 90-0737Brucella abortus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900446005.1Brucella abortustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900446005.1Brucella abortustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9899.8399.98
Best-match type99.9899.8399.98

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna