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ASM68171v1

  • Anomalous assembly.
Organism name:
Acinetobacter baumannii 1288284 (g-proteobacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: 1288284
BioSample:
SAMN02692974
BioProject:
PRJNA194785
Submitter:
Institute for Genome Sciences
Date:
2014/05/06
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Assembly anomaly:
contaminated, unverified source organism
Excluded from RefSeq:
  • contaminated
  • unverified source organism
  • genome length too large
GenBank assembly accession:
GCA_000681715.1 (latest)
RefSeq assembly accession:
GCF_000681715.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JMOF01
Assembly method:
MaSuRCA v. 2.0.3.1
Genome coverage:
72.67x
Sequencing technology:
Illumina

IDs: 173871 [UID] 1060018 [GenBank] 1648438 [RefSeq]

See Genome Information for Acinetobacter baumannii

There are 26896 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length6,046,433
Total ungapped length6,046,433
Number of contigs945
Contig N5012,908
Contig L50141
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)945

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,046,4339456,046,43312,90800

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter baumannii 1288284Acinetobacter baumannii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_016746035.1Acinetobacter baumanniitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000369045.1Acinetobacter pittiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type94.3955.1085.52
Best-match type96.7357.4891.53

ANI result

Taxonomy check statusBest match statusComment
Inconclusivemismatchcoverage is less than 80%