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Esch_coli_UMEA_3955-1_V1

Organism name:: Escherichia coli UMEA 3955-1 (E. coli)
Taxonomy check:: OK
Infraspecific name:: Strain: UMEA 3955-1
BioSample:: SAMN01885988
BioProject:: PRJNA186379
Submitter:: Broad Institute
Date:: 2013/08/29
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000461815.1 (latest)
RefSeq assembly accession:: GCF_000461815.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AWEK01
Assembly method:: allpaths v. R46390
Genome coverage:: 129.0x
Sequencing technology:: Illumina

IDs: 57021 [UID] 771858 [GenBank] 813168 [RefSeq]

See Genome Information for Escherichia coli

Pathogen Detection Resources

There are 266889 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000461815.1	=	GCF_000461815.1	Esch_coli_UMEA_3955-1_V1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length	5,417,113
Total ungapped length	5,366,331
Gaps between scaffolds	0
Number of scaffolds	16
Scaffold N50	655,652
Scaffold L50	3
Number of contigs	48
Contig N50	236,778
Contig L50	7
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	48

	ANI	Query coverage	Subject coverage
Declared type	99.02	88.60	91.79
Best-match type	99.02	88.60	91.79

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Esch_coli_UMEA_3955-1_V1

See Genome Information for Escherichia coli

Pathogen Detection Resources

There are 266889 assemblies for this organism

History (Show revision history)

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